1. Gene
  2. COL5A3 - collagen type V alpha 3 chain Gene

COL5A3 - collagen type V alpha 3 chain Gene

Homo sapiens
Gene ID: 50509 | Gene type: protein coding

About COL5A3

Cytogenetic location: 19p13.2 Genomic coordinates (GRCh38): 19:9,959,561-10,010,504 (from NCBI)

This gene has 2 transcripts (splice variants), 86 orthologues and 37 paralogues. Broad expression in placenta (RPKM 20.1), fat (RPKM 19.6) and 20 other tissues.

Summary

This gene encodes an alpha chain for one of the low abundance fibrillar collagens. Fibrillar collagen molecules are trimers that can be composed of one or more types of alpha chains. Type V collagen is found in tissues containing type I collagen and appears to regulate the assembly of heterotypic fibers composed of both type I and type V collagen. This gene product is closely related to type XI collagen and it is possible that the collagen chains of types V and XI constitute a single collagen type with tissue-specific chain combinations. Mutations in this gene are thought to be responsible for the symptoms of a subset of patients with Ehlers-Danlos syndrome type III. Messages of several sizes can be detected in northern blots but sequence information cannot confirm the identity of the shorter messages. [provided by RefSeq, Jul 2008]

COL5A3 Products(1)

mRNA Protein Name
NM_015719.4 NP_056534.2 collagen alpha-3(V) chain preproprotein

COL5A3 Protein Structure

Collagen

Collagen: Collagen triple helix repeat (20 copies) (391 - 440)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (482 - 538)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (824 - 877)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (905 - 950)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (932 - 989)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (1430 - 1488)

COLFI

COLFI: Fibrillar collagen C-terminal domain (1530 - 1743)

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  • 1745 a.a.
Protein Preferred Names Protein Names

collagen alpha-3(V) chain

collagen, type V, alpha 3

Related Diseases

Diseases Alias
Ehlers-Danlos Syndrome

Eds

Cutis Hyperelastica

Elastic Skin

Ehlers-Danlos Syndromes

Ed Syndrome

Ehlers Danlos Syndrome

Ehlers Danlos Disease

Eds - [Ehlers-Danlos Syndrome]

Colon Small Cell Carcinoma

Colonic Small Cell Carcinoma

Colon Small Cell Neuroendocrine Carcinoma

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Macaca mulatta COL5A3 VGNC VGNC:109604
Mus musculus COL5A3 MGD MGI:1858212
Bos taurus COL5A3 VGNC VGNC:27569
Felis catus COL5A3 VGNC VGNC:102030
Canis familiaris COL5A3 VGNC VGNC:39479
Rattus norvegicus COL5A3 RGD RGD:70922