1. Gene
  2. TAF10 - TATA-box binding protein associated factor 10 Gene

TAF10 - TATA-box binding protein associated factor 10 Gene

Homo sapiens

Also known as TAF2A; TAF2H; TAFII30

Gene ID: 6881 | Gene type: protein coding

About TAF10

Cytogenetic location: 11p15.4 Genomic coordinates (GRCh38): 11:6,606,294-6,612,216 (from NCBI)

This gene has 6 transcripts (splice variants) and 206 orthologues. Ubiquitous expression in spleen (RPKM 44.4), testis (RPKM 44.3) and 25 other tissues.

Summary

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes one of the small subunits of TFIID that is associated with a subset of TFIID complexes. Studies with human and mammalian cells have shown that this subunit is required for transcriptional activation by the Estrogen Receptor, for progression through the cell cycle, and may also be required for certain cellular differentiation programs. [provided by RefSeq, Jul 2008]

TAF10 Products(1)

mRNA Protein Name
NM_006284.4 NP_006275.1 transcription initiation factor TFIID subunit 10
Gene Ontology
  • Molecular Function
  • Biological Process
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
contributes to RNA polymerase II general transcription initiation factor activity IDA
IDA: Inferred from direct assay
9603525 GOA
enables RNA polymerase II general transcription initiation factor activity IDA
IDA: Inferred from direct assay
11564863 GOA
enables RNA polymerase binding IDA
IDA: Inferred from direct assay
15099517 GOA
enables enzyme binding IPI
IPI: Inferred from physical interaction
16415881 GOA
contributes to histone acetyltransferase activity IDA
IDA: Inferred from direct assay
9674425 GOA
enables identical protein binding IPI
IPI: Inferred from physical interaction
7923369 GOA
enables nuclear estrogen receptor binding IDA
IDA: Inferred from direct assay
7923369 GOA
contributes to protein binding IPI
IPI: Inferred from physical interaction
15870280 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
7729427 GOA
Biological Process GO Annotation Evidence Reference Source
involved in DNA-templated transcription initiation IDA
IDA: Inferred from direct assay
9212049 GOA
involved in RNA polymerase II preinitiation complex assembly IPI
IPI: Inferred from physical interaction
27007846 GOA
involved in mRNA transcription by RNA polymerase II IDA
IDA: Inferred from direct assay
17884155 GOA
involved in positive regulation of transcription initiation by RNA polymerase II IDA
IDA: Inferred from direct assay
17884155 GOA
involved in regulation of transcription by RNA polymerase II IDA
IDA: Inferred from direct assay
9603525 GOA
involved in transcription initiation at RNA polymerase II promoter IDA
IDA: Inferred from direct assay
9603525 GOA
Cellular Component GO Annotation Evidence Reference Source
part of SAGA complex IDA
IDA: Inferred from direct assay
9674425 GOA
located in cytoplasm IDA
IDA: Inferred from direct assay
15870280 GOA
located in nucleus EXP
EXP: Inferred from Experiment
23332750 GOA
located in nucleus IDA
IDA: Inferred from direct assay
11564863 GOA
located in perinuclear region of cytoplasm IDA
IDA: Inferred from direct assay
15870280 GOA
part of transcription factor TFIID complex IDA
IDA: Inferred from direct assay
7729427 GOA
part of transcription factor TFIID complex IPI
IPI: Inferred from physical interaction
23332750 GOA
part of transcription factor TFTC complex IDA
IDA: Inferred from direct assay
9603525 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

TAF10 Protein Structure

TFIID_30kDa

TFIID_30kDa: Transcription initiation factor TFIID 23-30kDa subunit (128 - 177)

  • 0
  • 100
  • 200
  • 218 a.a.
Protein Preferred Names Protein Names

transcription initiation factor TFIID subunit 10

STAF28

TAF10 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
TAF10 Q12962 ATXN7 Homo sapiens O15265
IF
15115762
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Cleft Palate, Cardiac Defects, And Mental Retardation

Cardiac Malformation, Cleft Lip/Palate, Microcephaly, And Digital Anomalies

CPCMR

Cleft Palate, Cardiac Defects, And Intellectual Disabillity

Cleft Palate, Cardiac Defects, And Intellectual Disability

Cardiac Malformation, Cleft Lip-Palate, Microcephaly And Digital Anomalies

Renal Artery Obstruction
Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Bos taurus TAF10 VGNC VGNC:35567
Mus musculus TAF10 MGD MGI:1346320
Rattus norvegicus TAF10 RGD RGD:1305907
Canis familiaris TAF10 VGNC VGNC:47073
Macaca mulatta TAF10 VGNC VGNC:101414