1. Academic Validation
  2. Expanding the Solvent/Protein Region Occupation of the Non-Nucleoside Reverse Transcriptase Inhibitor Binding Pocket for Improved Broad-Spectrum Anti-HIV-1 Efficacy: from Rigid Phenyl-Diarylpyrimidines to Flexible Hydrophilic Piperidine-Diarylpyrimidines

Expanding the Solvent/Protein Region Occupation of the Non-Nucleoside Reverse Transcriptase Inhibitor Binding Pocket for Improved Broad-Spectrum Anti-HIV-1 Efficacy: from Rigid Phenyl-Diarylpyrimidines to Flexible Hydrophilic Piperidine-Diarylpyrimidines

  • J Med Chem. 2024 Nov 14;67(21):19889-19904. doi: 10.1021/acs.jmedchem.4c02413.
Wen-Juan Huang 1 2 Christophe Pannecouque 3 Erik De Clercq 3 Angela Corona 4 Stefania Maloccu 4 Enzo Tramontano 4 Shuai Wang 1 2 Fen-Er Chen 1 2 5
Affiliations

Affiliations

  • 1 Engineering Center of Catalysis and Synthesis for Chiral Molecules, Department of Chemistry, Fudan University, Shanghai 200433, China.
  • 2 Shanghai Engineering Center of Industrial Asymmetric Catalysis for Chiral Drugs, Shanghai 200433, China.
  • 3 Rega Institute for Medical Research, KU Leuven, Herestraat 49, B-3000 Leuven, Belgium.
  • 4 Dept Appl Sci Biosyst, University of Cagliari, I-09042 Monserrato, Italy.
  • 5 School of Chemical Engineering, Jiangxi Normal University, Nanchang 330022, China.
Abstract

Considering the nonideal antiresistance efficacy of our previously reported non-nucleoside Reverse Transcriptase Inhibitor 7, a series of novel piperidine-diarylpyrimidine derivatives were designed through expanding solvent/protein region occupation. The representative compound 15f proved to be exceptionally potent against Y188L (EC50 = 23 nM), F227L + V106A (EC50 = 15 nM) and RES056 (EC50 = 45 nM), significantly better than 7. This analog exerted strong inhibition against wild-type HIV-1 (EC50 = 3 nM) and single mutant strains (L100I, K103N, Y181C, E138 K). Notably, its cytotoxicity and selectivity (CC50 = 18.23 μM, SI = 6537) were 4-fold better than etravirine and rilpivirine. Additionally, it exhibited minimal suppression of CYP isoenzymes and hERG, indicating low potential for drug-drug interactions and cardiotoxicity. No significant acute toxicity and tissue damage at a dose of 2 g/kg were revealed. These findings lay the groundwork for the advancement of 15f as a highly potent, safe, and broad-spectrum NNRTI for HIV therapy.

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