2. Academic Validation
  3. Macrophage polarization-related gene SOAT1 is involved in inflammatory response and functional recovery after spinal cord injury

Macrophage polarization-related gene SOAT1 is involved in inflammatory response and functional recovery after spinal cord injury

  • Mol Cell Biochem. 2025 Mar 6. doi: 10.1007/s11010-025-05246-7.
Peng Peng # 1 2,  Huitao Wang # 1 2 3,  Zhen Pang # 1 2,  Hui Zhang 1 2,  Sihan Hu 1 2 3,  Xingyi Ma 1,  Fangjing Yang 1,  Yanqun Qiu 1 2 3,  Fei Wang 1 2 3,  Wendong Xu 4 5 6 7 8 9 10
Affiliations

Affiliations

  • 1 Department of Hand Surgery, Huashan Hospital, Fudan University, Shanghai, China.
  • 2 The National Clinical Research Center for Aging and Medicine, Fudan University, Shanghai, China.
  • 3 Department of Hand and Upper Extremity Surgery, Jing'an District Central Hospital, Fudan University, Shanghai, China.
  • 4 Department of Hand Surgery, Huashan Hospital, Fudan University, Shanghai, China. wendongxufudan@163.com.
  • 5 The National Clinical Research Center for Aging and Medicine, Fudan University, Shanghai, China. wendongxufudan@163.com.
  • 6 Department of Hand and Upper Extremity Surgery, Jing'an District Central Hospital, Fudan University, Shanghai, China. wendongxufudan@163.com.
  • 7 Institutes of Brain Science, Fudan University, Shanghai, China. wendongxufudan@163.com.
  • 8 State Key Laboratory of Medical Neurobiology, Collaborative Innovation Center of Brain Science, Fudan University, Shanghai, China. wendongxufudan@163.com.
  • 9 Co-Innovation Center of Neuroregeneration, Nantong University, Nantong, 226000, China. wendongxufudan@163.com.
  • 10 Research Unit of Synergistic Reconstruction of Upper and Lower Limbs After Brain Injury, Chinese Academy of Medical Sciences, Beijing, China. wendongxufudan@163.com.
  • # Contributed equally.
PMID: 40050510 DOI: 10.1007/s11010-025-05246-7
Abstract

Macrophages polarization play crucial roles in regulating inflammation and functional recovery after spinal cord injury (SCI). This study aimed to investigate the key macrophage polarization-related genes (MPRGs) for the treatment of SCI. Our research involved identifying differentially expressed genes (DEGs), using immune infiltration analysis, weighted gene co-expression network analysis (WGCNA) and machine learning to screening out key MPRGs in the GSE5296. The discriminative potential of MPRGs were validated using expression analysis and receiver operating characteristic (ROC) curves in the GSE45376, while the distribution of hub MPRGs in different cell subtypes were visualized in the single-cell dataset GSE189070. The relationship between the MPRGs and immune infiltration was investigated through correlation analysis. Finally, we detected the effect of blocking sterol O-acyltransferase 1 (SOAT1) on macrophage polarization and functional recovery of SCI. A total of 52 MPRGs were identified. Elevated immune infiltration levels and activation of macrophage-associated biological pathways were noted after SCI. Machine learning determined SOAT1, LGALS3, HAVCR2, IRF8 and PTPRC as the hub MPRGs. External validation confirmed their expression, robust predictive value and distribution patterns. Immune infiltration analysis highlighted the strong correlation between SOAT1 and macrophages. Further, inhibiting of SOAT1 could enhance M2 macrophage polarization, improve inflammatory environment and promote functional recovery of SCI. Our study enhances the understanding of macrophage polarization-related genes in the inflammatory responses of SCI. Targeting SOAT1 emerges as a promising therapeutic strategy for SCI repair.

Keywords

Immune infiltration; Machine learning; Macrophages polarization; SOAT1; Spinal cord injury.

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