1. Gene
  2. Relb - avian reticuloendotheliosis viral (v-rel) oncogene related B Gene

Relb - avian reticuloendotheliosis viral (v-rel) oncogene related B Gene

Mus musculus

Also known as shep

Gene ID: 19698 | Gene type: protein coding

About Relb

Chromosome 7: 19,340,142-19,363,363 reverse strand.GRCm39:CM001000.3

This gene has 10 transcripts (splice variants), 195 orthologues, 4 paralogues and is associated with 108 phenotypes. Broad expression in spleen adult (RPKM 33.2), adrenal adult (RPKM 28.7) and 15 other tissues.

Summary

Enables DNA-binding transcription activator activity, RNA polymerase II-specific; RNA polymerase II cis-regulatory region sequence-specific DNA binding activity; and identical protein binding activity. Involved in circadian regulation of gene expression; negative regulation of transcription, DNA-templated; and positive regulation of transcription by RNA polymerase II. Acts upstream of or within several processes, including NIK/NF-kappaB signaling; antigen processing and presentation; and mononuclear cell differentiation. Located in cytosol and nucleus. Is expressed in axial skeleton; eye; heart; and ureter. Used to study atopic dermatitis. Human ortholog(s) of this gene implicated in breast Cancer and immunodeficiency 53. Orthologous to human RelB (RelB proto-oncogene, NF-kB subunit). [provided by Alliance of Genome Resources, Apr 2022]

Relb Products(2)

mRNA Protein Name
NM_009046.2 NP_033072.2 transcription factor RelB isoform 1
NM_001290457.1 NP_001277386.1 transcription factor RelB isoform 2
Gene Ontology
  • Molecular Function
  • Biological Process
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables DNA binding IDA
IDA: Inferred from direct assay
15944286 MGI
enables DNA-binding transcription factor activity IDA
IDA: Inferred from direct assay
23583643 MGI
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
IDA: Inferred from direct assay
22894897 MGI
enables identical protein binding IPI
IPI: Inferred from physical interaction
16154093 MGI
enables protein binding IPI
IPI: Inferred from physical interaction
11931770 MGI
Biological Process GO Annotation Evidence Reference Source
acts upstream of or within T-helper 1 cell differentiation IMP
IMP: Inferred from mutant phenotype
16081776 MGI
acts upstream of or within T-helper 1 type immune response IMP
IMP: Inferred from mutant phenotype
7845467 MGI
acts upstream of or within antigen processing and presentation IMP
IMP: Inferred from mutant phenotype
7845467 MGI
involved in circadian regulation of gene expression IMP
IMP: Inferred from mutant phenotype
22894897 MGI
acts upstream of or within myeloid dendritic cell differentiation IMP
IMP: Inferred from mutant phenotype
7845467 MGI
involved in negative regulation of DNA-templated transcription IDA
IDA: Inferred from direct assay
22894897 MGI
involved in non-canonical NF-kappaB signal transduction IDA
IDA: Inferred from direct assay
23583643 MGI
Cellular Component GO Annotation Evidence Reference Source
located in cytosol IDA
IDA: Inferred from direct assay
11931770 MGI
located in nucleus IDA
IDA: Inferred from direct assay
11931770 MGI
is active in synapse IDA
IDA: Inferred from direct assay
22514330 MGI
is active in synapse IEP
IEP: Inferred from expression pattern
22514330 MGI
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

Relb Protein Structure

RelB_leu_zip

RelB_leu_zip: cl24683 (0 - 75)

RHD-n_RelB

RHD-n_RelB: cd07886 (102 - 273)

RHD_dimer

RHD_dimer: pfam16179 (281 - 377)

RelB_transactiv

RelB_transactiv: cl24684 (380 - 557)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 500
  • 558 a.a.
Protein Preferred Names Protein Names

transcription factor RelB

Orthologs Information

Species Symbol Source ID
Homo sapiens Relb NCBI NCBI:5971