1. Gene
  2. OTP - orthopedia homeobox Gene

OTP - orthopedia homeobox Gene

Homo sapiens
Gene ID: 23440 | Gene type: protein coding

About OTP

Cytogenetic location: 5q14.1 Genomic coordinates (GRCh38): 5:77,628,712-77,638,713 (from NCBI)

This gene has 2 transcripts (splice variants), 247 orthologues and 50 paralogues. Low expression observed in reference dataset.

Summary

This gene encodes a member of the homeodomain (HD) family. HD family proteins are helix-turn-helix transcription factors that play key roles in the specification of cell fates. This protein may function during brain development. [provided by RefSeq, Jul 2008]

OTP Products(1)

mRNA Protein Name
NM_032109.3 NP_115485.1 homeobox protein orthopedia
Gene Ontology
  • Molecular Function
  • Biological Process
Molecular Function GO Annotation Evidence Reference Source
enables DNA-binding transcription repressor activity, RNA polymerase II-specific IDA
IDA: Inferred from direct assay
29107289 GOA
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
IDA: Inferred from direct assay
29107289 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
32296183 GOA
Biological Process GO Annotation Evidence Reference Source
involved in negative regulation of transcription by RNA polymerase II IDA
IDA: Inferred from direct assay
29107289 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

OTP Protein Structure

Homeobox

Homeobox: Homeobox domain (105 - 161)

OAR

OAR: OAR domain (302 - 321)

  • 0
  • 100
  • 200
  • 300
  • 325 a.a.
Protein Preferred Names Protein Names

homeobox protein orthopedia

orthopedia homolog

OTP Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra OTP Q5XKR4 CPNE7 Homo sapiens Q9UBL6-2
Validated Y2H
32296183
Intra OTP Q5XKR4 SLC12A7 Homo sapiens Q9Y666-2
Validated Y2H
32296183
Intra OTP Q5XKR4 EOMES Homo sapiens O95936-4
Y2H Array
32296183
Intra OTP Q5XKR4 EOMES Homo sapiens O95936-4
Y2H Prey Pooling
32296183
Intra OTP Q5XKR4 BEX1 Homo sapiens Q9HBH7
Validated Y2H
32296183
Intra OTP Q5XKR4 TPGS2 Homo sapiens Q68CL5
Validated Y2H
32296183
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Axenfeld-Rieger Syndrome, Type 3

Axenfeld-Rieger Syndrome Type 3

RIEG3

Anterior Chamber Cleavage Syndrome

Anterior Segment Mesenchymal Dysgenesis

Axenfeld-Rieger Anomaly With Cardiac Defects And/Or Sensorineural Hearing Loss

Axenfeld-Rieger Anomaly With Or Without Cardiac Defects And/Or Sensorineural Hearing Loss

Rieger Syndrome Type 3

Axenfeld-Rieger Anomaly

Rieger Syndrome, Type 3

Axenfeld-Rieger Syndrome 3

Axenfeld Anomaly

Rieger Anomaly

Rieger Syndrome

Rieger Eye Malformation Sequence

Pulmonary Neuroendocrine Tumor

Neuroendocrine Neoplasm Of Lung

Axenfeld-Rieger Syndrome

Axenfeld Syndrome

Rieger Syndrome

Rieger Anomaly

Axenfeld Anomaly

Anomaly, Rieger'S

Hagedoom Syndrome

Rgs - Rieger Syndrome

Rieger'S Anomaly

Goniodysgenesis Hypodontia

Iridogoniodysgenesis With Somatic Anomalies

Ars

Axenfeld And Rieger Anomaly

Axra

Axrs

Rieger Eye Malformation Sequence

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Canis familiaris OTP VGNC VGNC:44182
Mus musculus OTP MGD MGI:99835
Macaca mulatta OTP VGNC VGNC:84457
Rattus norvegicus OTP RGD RGD:727945
Felis catus OTP VGNC VGNC:102277
Bos taurus OTP VGNC VGNC:55130