1. Gene
  2. POLR2J3 - RNA polymerase II subunit J3 Gene

POLR2J3 - RNA polymerase II subunit J3 Gene

Homo sapiens

Also known as RPB11b2

Gene ID: 548644 | Gene type: protein coding

About POLR2J3

This gene has 8 transcripts (splice variants), 175 orthologues and 3 paralogues. Ubiquitous expression in esophagus (RPKM 51.4), thyroid (RPKM 33.4) and 25 other tissues.

Summary

This gene is a member of the RNA polymerase II subunit 11 gene family, which includes three genes in a cluster on chromosome 7q22.1 and a pseudogene on chromosome 7p13. The founding member of this family, DNA directed RNA polymerase II polypeptide J, has been shown to encode a subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. This locus produces multiple, alternatively spliced transcripts that potentially express isoforms with distinct C-termini compared to DNA directed RNA polymerase II polypeptide J. Most or all variants are spliced to include additional non-coding exons at the 3' end which makes them candidates for nonsense-mediated decay (NMD). Consequently, it is not known if this locus expresses a protein or proteins in vivo. [provided by RefSeq, Jul 2008]

POLR2J3 Products(1)

mRNA Protein Name
NM_001097615.3 NP_001091084.2 DNA-directed RNA polymerase II subunit RPB11-b2
Gene Ontology
  • Molecular Function
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
32296183 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

POLR2J3 Protein Structure

RNA_pol_L_2

RNA_pol_L_2: RNA polymerase Rpb3/Rpb11 dimerisation domain (28 - 104)

  • 0
  • 100
  • 115 a.a.
Protein Preferred Names Protein Names

DNA-directed RNA polymerase II subunit RPB11-b2

DNA-directed RNA polymerase II subunit 11

POLR2J3 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
POLR2J3 Q9H1A7 POLR1C Homo sapiens O15160
Y2H Array
32296183
Intra
POLR2J3 Q9H1A7 SATB2 Homo sapiens Q9UPW6
Validated Y2H
32296183
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Leukorrhea

Discharge - Leukorrhea

Leukorrhea Of Vagina

Noonan Syndrome 6

NS6

Noonan Syndrome, Type 6

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus POLR2J3 MGD MGI:109582