2. Gene
  3. COL23A1 - collagen type XXIII alpha 1 chain Gene

COL23A1 - collagen type XXIII alpha 1 chain Gene

  • Gene
  • Protein
  • Disease
  • Agent
  • Ortholog
Homo sapiens
Gene ID: 91522 | Gene type: protein coding

About COL23A1

Cytogenetic location: 5q35.3 Genomic coordinates (GRCh38): 5:178,237,618-178,590,393 (from NCBI)

This gene has 9 transcripts (splice variants), 132 orthologues and 37 paralogues. Biased expression in thyroid (RPKM 9.3), heart (RPKM 2.2) and 10 other tissues.

Summary

COL23A1 is a member of the transmembrane collagens, a subfamily of the nonfibrillar collagens that contain a single pass hydrophobic transmembrane domain (Banyard et al., 2003 [PubMed 12644459]).[supplied by OMIM, Mar 2008]

COL23A1 Products(1)

mRNA Protein Name
NM_173465.4 NP_775736.2 collagen alpha-1(XXIII) chain
Gene Ontology
  • Molecular Function
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
25416956 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

COL23A1 Protein Structure

Collagen

Collagen: Collagen triple helix repeat (20 copies) (120 - 172)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (160 - 218)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (199 - 256)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (251 - 305)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (321 - 375)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (342 - 396)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (412 - 470)

Collagen

Collagen: Collagen triple helix repeat (20 copies) (463 - 520)

  • 0
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  • 500
  • 540 a.a.
Protein Preferred Names Protein Names

collagen alpha-1(XXIII) chain

collagen, type XXIII, alpha 1

Related Diseases

Diseases Alias
Paraurethral Gland Cancer

Malignant Tumor Of Paraurethral Gland

Malignant Tumor Of The Paraurethral Gland

Skene Gland Carcinoma

Carcinoma Of The Paraurethral Gland

Paraurethral Gland Carcinoma
Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Related Agents

Pre-clinical Phase
Bioactive Molecules (1)
Cat. No. Product Name Effect
Purity Rare Diseases
HY-RS02975 COL23A1 Human Pre-designed siRNA Set A Pre-designed Sets / Unkown

Orthologs Information

Species Symbol Source ID
Mus musculus COL23A1 MGD MGI:2653243
Rattus norvegicus COL23A1 RGD RGD:727898
Bos taurus COL23A1 VGNC VGNC:54416
Felis catus COL23A1 VGNC VGNC:102181
Canis familiaris COL23A1 VGNC VGNC:51705