COL23A1 - collagen type XXIII alpha 1 chain Gene

Homo sapiens

Gene ID: 91522 | Gene type: protein coding

About COL23A1

Cytogenetic location: 5q35.3 Genomic coordinates (GRCh38): 5:178,237,618-178,590,393 (from NCBI)

This gene has 9 transcripts (splice variants), 132 orthologues and 37 paralogues. Biased expression in thyroid (RPKM 9.3), heart (RPKM 2.2) and 10 other tissues.

Summary

COL23A1 is a member of the transmembrane collagens, a subfamily of the nonfibrillar collagens that contain a single pass hydrophobic transmembrane domain (Banyard et al., 2003 [PubMed 12644459]).[supplied by OMIM, Mar 2008]

COL23A1 Products(1)

mRNA	Protein	Name
NM_173465.4	NP_775736.2	collagen alpha-1(XXIII) chain

Gene Ontology

Molecular Function

Molecular Function GO Annotation	Evidence	Reference	Source
enables protein binding	IPI IPI: Inferred from physical interaction	25416956	GOA

EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

COL23A1 Protein Structure

Collagen

0
100
200
300
400
500
540 a.a.

Protein Preferred Names

Protein Names

collagen alpha-1(XXIII) chain

collagen, type XXIII, alpha 1

COL23A1 Protein-protein interaction Information

Type Cross Intra	Protein Name	Protein ID	Interactor	Interactor Species	Interactor ID	Detection Method	Reference
Intra	COL23A1	Q86Y22	EXOSC8	Homo sapiens	Q96B26	Validated Y2H	25416956

Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases

Alias

Paraurethral Gland Cancer

Malignant Tumor Of Paraurethral Gland	Malignant Tumor Of The Paraurethral Gland
Skene Gland Carcinoma	Carcinoma Of The Paraurethral Gland
Paraurethral Gland Carcinoma

Diseases	Alias
Waldenstroem'S Macroglobulinemia	Waldenstroem'S Macroglobulinemia Waldenstroem'S Macroglobulinemia Macroglobulinemia Of Waldenstrom Lymphoplasmacytic Lymphoma With Igm Gammopathy Lymphoplasmacytic Lymphoma Waldenstroem'S Macroglobulinemia Waldenstroem'S Macroglobulinemia Macroglobulinemia Of Waldenstrom Lymphoplasmacytic Lymphoma With Igm Gammopathy Lymphoplasmacytic Lymphoma

Related Agents

Pre-clinical Phase

Bioactive Molecules (1)

Cat. No.	Product Name	Effect	Purity	Rare Diseases
HY-RS02975	COL23A1 Human Pre-designed siRNA Set A	Pre-designed Sets	/	Unkown

Orthologs Information

Species	Symbol	Source	ID
Mus musculus	COL23A1	MGD	MGI:2653243
Rattus norvegicus	COL23A1	RGD	RGD:727898
Bos taurus	COL23A1	VGNC	VGNC:54416
Felis catus	COL23A1	VGNC	VGNC:102181
Canis familiaris	COL23A1	VGNC	VGNC:51705

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