1. Gene
  2. POLR2C - RNA polymerase II subunit C Gene

POLR2C - RNA polymerase II subunit C Gene

Homo sapiens

Also known as RPB3; RPB31; hRPB33; hsRPB3

Gene ID: 5432 | Gene type: protein coding

About POLR2C

Cytogenetic location: 16q21 Genomic coordinates (GRCh38): 16:57,462,679-57,472,009 (from NCBI)

This gene has 8 transcripts (splice variants), 215 orthologues and 2 paralogues. Ubiquitous expression in thyroid (RPKM 43.5), adrenal (RPKM 39.1) and 25 other tissues.

Summary

This gene encodes the third largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes. The product of this gene contains a cysteine rich region and exists as a heterodimer with another polymerase subunit, POLR2J. These two subunits form a core subassembly unit of the polymerase. A pseudogene has been identified on chromosome 21. [provided by RefSeq, Jul 2008]

POLR2C Products(1)

mRNA Protein Name
NM_032940.3 NP_116558.1 DNA-directed RNA polymerase II subunit RPB3
Gene Ontology
  • Molecular Function
  • Biological Process
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
12860379 GOA
Biological Process GO Annotation Evidence Reference Source
involved in transcription by RNA polymerase II IDA
IDA: Inferred from direct assay
9852112 GOA
Cellular Component GO Annotation Evidence Reference Source
part of RNA polymerase II, core complex IDA
IDA: Inferred from direct assay
9852112 GOA
located in nucleus IDA
IDA: Inferred from direct assay
9852112 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

POLR2C Protein Structure

RNA_pol_L

RNA_pol_L: RNA polymerase Rpb3/Rpb11 dimerisation domain (20 - 256)

RNA_pol_A_bac

RNA_pol_A_bac: RNA polymerase Rpb3/RpoA insert domain (50 - 177)

  • 0
  • 100
  • 200
  • 275 a.a.
Protein Preferred Names Protein Names

DNA-directed RNA polymerase II subunit RPB3

DNA-directed RNA polymerase II 33 kDa polypeptide

POLR2C Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
POLR2C P19387 ATF4 Homo sapiens P18848
Y2H
12860379
Intra
POLR2C P19387 ATF4 Homo sapiens P18848 12860379
Cross: Cross-species interaction Intra: Intraspecies interaction

POLR2C Antibodies

Cat. No. Product Name Application Reactivity
HY-P82702 RNA Polymerase II Subunit B3 Antibody (YA2447) WB, IHC-P Human, Mouse, Rat

Related Diseases

Diseases Alias
Immunodeficiency 25

Immunodeficiency Due To Defect In Cd3-Zeta

IMD25

Immunodeficiency, Type 25

Nemaline Myopathy 7

NEM7

Nemaline Myopathy 7, Autosomal Recessive

Cfl2-Related Nemaline Myopathy

Myopathy, Nemaline, Type 7

Fanconi Anemia, Complementation Group A

Fanconi Anemia

Fanconi Pancytopenia

Fanconi Anemia Complementation Group A

FANCA

Fa

Fanconi Panmyelopathy

Fanconi'S Anemia

Fanconi Anaemia

Fanconi'S Anaemia

Fanconi Hypoplastic Anemia

Estren-Dameshek Variant Of Fanconi Anemia

Estren-Dameshek Variant Of Fanconi Pancytopenia

Fanconi Anemia Estren-Dameshek Variant

Fanconis Anemia

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Rattus norvegicus POLR2C RGD RGD:1306935
Macaca mulatta POLR2C VGNC VGNC:76212
Bos taurus POLR2C VGNC VGNC:33137
Canis familiaris POLR2C VGNC VGNC:44794
Mus musculus POLR2C MGD MGI:109299