1. Gene
  2. TAF6L - TATA-box binding protein associated factor 6 like Gene

TAF6L - TATA-box binding protein associated factor 6 like Gene

Homo sapiens

Also known as PAF65A

Gene ID: 10629 | Gene type: protein coding

About TAF6L

Cytogenetic location: 11q12.3 Genomic coordinates (GRCh38): 11:62,771,396-62,787,342 (from NCBI)

This gene has 8 transcripts (splice variants), 187 orthologues and 1 paralogue. Ubiquitous expression in kidney (RPKM 7.9), fat (RPKM 5.1) and 25 other tissues.

Summary

Initiation of transcription by RNA polymerase II requires the activities of more than 70 polypeptides. The protein that coordinates these activities is transcription factor IID (TFIID), which binds to the core promoter to position the polymerase properly, serves as the scaffold for assembly of the remainder of the transcription complex, and acts as a channel for regulatory signals. TFIID is composed of the TATA-binding protein (TBP) and a group of evolutionarily conserved proteins known as TBP-associated factors or TAFs. TAFs may participate in basal transcription, serve as coactivators, function in promoter recognition or modify general transcription factors (GTFs) to facilitate complex assembly and transcription initiation. This gene encodes a protein that is a component of the PCAF histone acetylase complex and structurally similar to one of the histone-like TAFs, TAF6. The PCAF histone acetylase complex, which is composed of more than 20 polypeptides some of which are TAFs, is required for myogenic transcription and differentiation. [provided by RefSeq, Jul 2008]

TAF6L Products(1)

mRNA Protein Name
NM_006473.4 NP_006464.1 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L
Gene Ontology
  • Molecular Function
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
9674425 GOA
enables transcription coactivator activity IDA
IDA: Inferred from direct assay
11564863 GOA
Cellular Component GO Annotation Evidence Reference Source
part of SAGA complex IDA
IDA: Inferred from direct assay
11564863 GOA
located in nucleus IDA
IDA: Inferred from direct assay
11564863 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

TAF6L Protein Structure

TAF

TAF: TATA box binding protein associated factor (TAF) (10 - 73)

TAF6_C

TAF6_C: TAF6 C-terminal HEAT repeat domain (242 - 333)

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  • 500
  • 622 a.a.
Protein Preferred Names Protein Names

TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L

PAF65-alpha

TAF6L Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
TAF6L Q9Y6J9 PFDN5 Homo sapiens Q99471
Y2H Prey Pooling
32296183
Intra
TAF6L Q9Y6J9 PFDN5 Homo sapiens Q99471
Y2H Array
32296183
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Y2H Array
16713569
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Y2H Array
25416956
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Y2H Prey Pooling
32296183
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Y2H Array
32296183
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Y2H Prey Pooling
25416956
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Pull Down
9674425
Intra
TAF6L Q9Y6J9 TAF9 Homo sapiens Q16594
Anti Tag CoIP
33961781
Intra
TAF6L Q9Y6J9 TAF9B Homo sapiens Q9HBM6
Anti Tag CoIP
28514442
Intra
TAF6L Q9Y6J9 TAF9B Homo sapiens Q9HBM6
Y2H Prey Pooling
32296183
Intra
TAF6L Q9Y6J9 TAF9B Homo sapiens Q9HBM6
Anti Tag CoIP
33961781
Intra
TAF6L Q9Y6J9 TAF9B Homo sapiens Q9HBM6
Y2H Array
32296183
Cross: Cross-species interaction Intra: Intraspecies interaction

Orthologs Information

Species Symbol Source ID
Felis catus TAF6L VGNC VGNC:65936
Bos taurus TAF6L VGNC VGNC:35578
Canis familiaris TAF6L VGNC VGNC:47086
Mus musculus TAF6L MGD MGI:2444957
Macaca mulatta TAF6L VGNC VGNC:78149
Rattus norvegicus TAF6L RGD RGD:1310123