SLAIN1 - SLAIN motif family member 1 Gene

Homo sapiens

Also known as C13orf32

Gene ID: 122060 | Gene type: protein coding

About SLAIN1

Cytogenetic location: 13q22.3 Genomic coordinates (GRCh38): 13:77,697,687-77,764,229 (from NCBI)

This gene has 18 transcripts (splice variants), 267 orthologues and 1 paralogue. Biased expression in brain (RPKM 39.3), testis (RPKM 10.8) and 7 other tissues.

Summary

Predicted to be located in cytoplasm and Cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]

SLAIN1 Products(11)

mRNA	Protein	Name
NM_001040153.4	NP_001035243.2	SLAIN motif-containing protein 1 isoform A precursor
NM_001242868.2	NP_001229797.1	SLAIN motif-containing protein 1 isoform C
NM_001242869.2	NP_001229798.1	SLAIN motif-containing protein 1 isoform D
NM_001242870.2	NP_001229799.1	SLAIN motif-containing protein 1 isoform D
NM_001242871.2	NP_001229800.1	SLAIN motif-containing protein 1 isoform E
NM_001366665.1	NP_001353594.1	SLAIN motif-containing protein 1 isoform F precursor
NM_001366666.1	NP_001353595.1	SLAIN motif-containing protein 1 isoform B
NM_001411026.1	NP_001397955.1	SLAIN motif-containing protein 1 isoform G
NM_001412123.1	NP_001399052.1	SLAIN motif-containing protein 1 isoform H
NM_001412125.1	NP_001399054.1	SLAIN motif-containing protein 1 isoform I
NM_144595.4	NP_653196.1	SLAIN motif-containing protein 1 isoform B

Gene Ontology

Molecular Function

Molecular Function GO Annotation	Evidence	Reference	Source
enables protein binding	IPI IPI: Inferred from physical interaction	25416956	GOA

EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SLAIN1 Protein Structure

SLAIN

0
100
200
300
400
500
568 a.a.

Protein Preferred Names

Protein Names

SLAIN motif-containing protein 1

SLAIN1 Protein-protein interaction Information

Type Cross Intra	Protein Name	Protein ID	Interactor	Interactor Species	Interactor ID	Detection Method	Reference
Intra	SLAIN1	Q8ND83	RFPL3	Homo sapiens	O75679	Y2H Array	32296183
Intra	SLAIN1	Q8ND83	RFPL3	Homo sapiens	O75679	Y2H Prey Pooling	32296183
Intra	SLAIN1	Q8ND83	PATZ1	Homo sapiens	Q9HBE1-4	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	CARD9	Homo sapiens	Q9H257-2	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	LMO3	Homo sapiens	Q8TAP4-4	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	PRPF31	Homo sapiens	Q8WWY3	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	PSMA3	Homo sapiens	P25788	Validated Y2H	25416956
Intra	SLAIN1	Q8ND83	PDLIM7	Homo sapiens	Q9NR12	Y2H Array	32296183
Intra	SLAIN1	Q8ND83	PDLIM7	Homo sapiens	Q9NR12	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	PDLIM7	Homo sapiens	Q9NR12	Y2H Prey Pooling	32296183
Intra	SLAIN1	Q8ND83	PFDN5	Homo sapiens	Q99471	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	PFDN5	Homo sapiens	Q99471	Y2H Array	32296183
Intra	SLAIN1	Q8ND83	PFDN5	Homo sapiens	Q99471	Y2H Prey Pooling	32296183
Intra	SLAIN1	Q8ND83	EXOSC8	Homo sapiens	Q96B26	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	EXOSC8	Homo sapiens	Q96B26	Y2H Prey Pooling	32296183
Intra	SLAIN1	Q8ND83	EXOSC8	Homo sapiens	Q96B26	Y2H Array	32296183
Intra	SLAIN1	Q8ND83	TSSK3	Homo sapiens	Q96PN8	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	NXF1	Homo sapiens	Q9UBU9	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	GOLGA1	Homo sapiens	Q92805	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	CRACR2A	Homo sapiens	Q9BSW2	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	FHL3	Homo sapiens	Q13643	Y2H Prey Pooling	25416956
Intra	SLAIN1	Q8ND83	FHL3	Homo sapiens	Q13643	Y2H Prey Pooling	32296183
Intra	SLAIN1	Q8ND83	FHL3	Homo sapiens	Q13643	Y2H Array	25416956
Intra	SLAIN1	Q8ND83	FHL3	Homo sapiens	Q13643	Y2H Array	32296183
Intra	SLAIN1	Q8ND83	NTAQ1	Homo sapiens	Q96HA8	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	ARMC7	Homo sapiens	Q9H6L4	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	HOMER3	Homo sapiens	Q9NSC5	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	KIF9	Homo sapiens	Q9HAQ2	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	AIRIM	Homo sapiens	Q9NX04	Validated Y2H	32296183
Intra	SLAIN1	Q8ND83	TBC1D22B	Homo sapiens	Q9NU19	Validated Y2H	32296183

Cross: Cross-species interaction Intra: Intraspecies interaction

Related Agents

Pre-clinical Phase

Bioactive Molecules (1)

Cat. No.	Product Name	Effect	Purity	Rare Diseases
HY-RS12977	SLAIN1 Human Pre-designed siRNA Set A	Pre-designed Sets	/	Unkown

Orthologs Information

Species	Symbol	Source	ID
Canis familiaris	SLAIN1	VGNC	VGNC:46204
Mus musculus	SLAIN1	MGD	MGI:2145578
Macaca mulatta	SLAIN1	VGNC	VGNC:106296
Felis catus	SLAIN1	VGNC	VGNC:65175
Rattus norvegicus	SLAIN1	RGD	RGD:1308626
Bos taurus	SLAIN1	VGNC	VGNC:56645

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