1. Gene
  2. MRPS18B - mitochondrial ribosomal protein S18B Gene

MRPS18B - mitochondrial ribosomal protein S18B Gene

Homo sapiens

Also known as PTD017; S18amt; C6orf14; HSPC183; MRPS18-2; HumanS18a; MRP-S18-2

Gene ID: 28973 | Gene type: protein coding

About MRPS18B

Cytogenetic location: 6p21.33 Genomic coordinates (GRCh38): 6:30,617,840-30,626,392 (from NCBI)

This gene has 4 transcripts (splice variants), 1 gene allele and 202 orthologues. Ubiquitous expression in heart (RPKM 30.3), thyroid (RPKM 26.9) and 25 other tissues.

Summary

Mammalian mitochondrial ribosomal proteins are encoded by nuclear genes and help in protein synthesis within the mitochondrion. Mitochondrial ribosomes (mitoribosomes) consist of a small 28S subunit and a large 39S subunit. They have an estimated 75% protein to rRNA composition compared to prokaryotic ribosomes, where this ratio is reversed. Another difference between mammalian mitoribosomes and prokaryotic ribosomes is that the latter contain a 5S rRNA. Among different species, the proteins comprising the mitoribosome differ greatly in sequence, and sometimes in biochemical properties, which prevents easy recognition by sequence homology. This gene encodes a 28S subunit protein that belongs to the ribosomal protein S18P family. The encoded protein is one of three that has significant sequence similarity to Bacterial S18 proteins. The primary sequences of the three human mitochondrial S18 proteins are no more closely related to each Other than they are to the prokaryotic S18 proteins. Pseudogenes corresponding to this gene are found on chromosomes 1q and 2q. [provided by RefSeq, Jul 2008]

MRPS18B Products(1)

mRNA Protein Name
NM_014046.4 NP_054765.1 28S ribosomal protein S18b, mitochondrial
Gene Ontology
  • Molecular Function
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
18391203 GOA
Cellular Component GO Annotation Evidence Reference Source
part of mitochondrial small ribosomal subunit IDA
IDA: Inferred from direct assay
25838379 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

MRPS18B Protein Structure

Ribosomal_S18

Ribosomal_S18: Ribosomal protein S18 (110 - 163)

  • 0
  • 100
  • 200
  • 258 a.a.
Protein Preferred Names Protein Names

28S ribosomal protein S18b, mitochondrial

28S ribosomal protein S18-2, mitochondrial

MRPS18B Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
MRPS18B Q9Y676 MRPS22 Homo sapiens P82650
Crosslink
30021884
Intra
MRPS18B Q9Y676 MRPS22 Homo sapiens P82650
Anti Tag CoIP
33961781
Intra
MRPS18B Q9Y676 MRPS27 Homo sapiens Q92552
Anti Tag CoIP
33961781
Intra
MRPS18B Q9Y676 MRPS27 Homo sapiens Q92552
Anti Bait CoIP
22003127
Intra
MRPS18B Q9Y676 RB1 Homo sapiens P06400
Pull Down
18391203
Cross
MRPS18B Q9Y676 EBNA6 Epstein-Barr virus P03204
Anti Bait CoIP
18391203
Cross
MRPS18B Q9Y676 EBNA6 Epstein-Barr virus P03204
SPR
18391203
Cross
MRPS18B Q9Y676 EBNA6 Epstein-Barr virus P03204
Pull Down
18391203
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Loeys-Dietz Syndrome 4

LDS4

Aneurysm, Aortic And Cerebral, With Arterial Tortuosity And Skeletal Manifestations

Loeys-Dietz Syndrome Type 4

Aortic And Cerebral Aneurysm With Arterial Tortuosity And Skeletal Manifestations

Loeys-Dietz Syndrome, Type 4

Megaesophagus

Esophageal Achalasia

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Canis familiaris MRPS18B VGNC VGNC:43413
Bos taurus MRPS18B VGNC VGNC:50008
Macaca mulatta MRPS18B VGNC VGNC:74768
Rattus norvegicus MRPS18B RGD RGD:1302998
Mus musculus MRPS18B MGD MGI:1914223
Felis catus MRPS18B VGNC VGNC:63616