1. Gene
  2. RBCK1 - RANBP2-type and C3HC4-type zinc finger containing 1 Gene

RBCK1 - RANBP2-type and C3HC4-type zinc finger containing 1 Gene

Homo sapiens

Also known as XAP3; XAP4; HOIL1; PBMEI; PGBM1; RBCK2; RNF54; HOIL-1; ZRANB4; C20orf18; UBCE7IP3

Gene ID: 10616 | Gene type: protein coding

About RBCK1

Cytogenetic location: 20p13 Genomic coordinates (GRCh38): 20:408,299-432,139 (from NCBI)

This gene has 20 transcripts (splice variants), 190 orthologues, 2 paralogues and is associated with 3 phenotypes. Ubiquitous expression in spleen (RPKM 15.0), prostate (RPKM 9.4) and 25 other tissues.

Summary

The protein encoded by this gene is similar to mouse UIP28/UbcM4 interacting protein. Alternative splicing has been observed at this locus, resulting in distinct isoforms. [provided by RefSeq, Jul 2008]

RBCK1 Products(6)

mRNA Protein Name
NM_001323956.2 NP_001310885.1 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 3
NM_001323958.2 NP_001310887.1 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 3
NM_001323960.2 NP_001310889.1 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 4
NM_001410770.1 NP_001397699.1 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 5
NM_006462.6 NP_006453.1 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 1
NM_031229.4 NP_112506.2 ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform 2
Gene Ontology
  • Molecular Function
  • Biological Process
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables identical protein binding IPI
IPI: Inferred from physical interaction
25416956 GOA
enables protein binding IPI
IPI: Inferred from physical interaction
16083853 GOA
enables protein sequestering activity IDA
IDA: Inferred from direct assay
16083853 GOA
enables transcription coactivator activity IDA
IDA: Inferred from direct assay
20103625 GOA
enables ubiquitin binding IDA
IDA: Inferred from direct assay
21455181 GOA
enables ubiquitin-protein transferase activity IDA
IDA: Inferred from direct assay
12629548 GOA
Biological Process GO Annotation Evidence Reference Source
involved in T cell receptor signaling pathway IDA
IDA: Inferred from direct assay
20005846 GOA
involved in cytoplasmic sequestering of protein IDA
IDA: Inferred from direct assay
16083853 GOA
involved in defense response to bacterium IMP
IMP: Inferred from mutant phenotype
28481331 GOA
involved in negative regulation of NF-kappaB transcription factor activity IDA
IDA: Inferred from direct assay
17449468 GOA
involved in positive regulation of NF-kappaB transcription factor activity IDA
IDA: Inferred from direct assay
19136968 GOA
involved in positive regulation of canonical NF-kappaB signal transduction IDA
IDA: Inferred from direct assay
19136968 GOA
involved in proteasome-mediated ubiquitin-dependent protein catabolic process IMP
IMP: Inferred from mutant phenotype
17449468 GOA
involved in protein linear polyubiquitination IDA
IDA: Inferred from direct assay
21455173 GOA
involved in protein polyubiquitination IDA
IDA: Inferred from direct assay
12629548 GOA
Cellular Component GO Annotation Evidence Reference Source
part of LUBAC complex IDA
IDA: Inferred from direct assay
17006537 GOA
part of LUBAC complex IPI
IPI: Inferred from physical interaction
21455180 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

RBCK1 Protein Structure

zf-RING_2

zf-RING_2: Ring finger domain (281 - 324)

IBR

IBR: IBR domain, a half RING-finger domain (362 - 411)

IBR

IBR: IBR domain, a half RING-finger domain (440 - 476)

  • 0
  • 100
  • 200
  • 300
  • 400
  • 510 a.a.
Protein Preferred Names Protein Names

ranBP-type and C3HC4-type zinc finger-containing protein 1

HBV-associated factor 4

RBCK1 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
RBCK1 Q9BYM8 NDUFAF3 Homo sapiens Q9BU61-2 25416956
Intra
RBCK1 Q9BYM8 UBE2N Homo sapiens P61088 19549727
Intra
RBCK1 Q9BYM8 UBE2L6 Homo sapiens O14933 19549727
Intra
RBCK1 Q9BYM8 UBE2L6 Homo sapiens O14933 25416956
Intra
RBCK1 Q9BYM8 UBE2L6 Homo sapiens O14933 25416956
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 21455180
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 29892012
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 30561431
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 21455180
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 17006537
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0
GMS
22430200
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 22430200
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 21455180
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0
GMS
21455180
Intra
RBCK1 Q9BYM8 RNF31 Homo sapiens Q96EP0 21455181
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6 30561431
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6 21455180
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6 21455180
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6 21455181
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6 21455180
Intra
RBCK1 Q9BYM8 SHARPIN Homo sapiens Q9H0F6
GMS
21455180
Cross
RBCK1 Q9BYM8 Hoxa1 Mus musculus P09022
Y2H
23088713
Intra
RBCK1 Q9BYM8 UBE2K Homo sapiens P61086 32814053
Intra
RBCK1 Q9BYM8 UBE2K Homo sapiens P61086 32814053
Intra
RBCK1 Q9BYM8 UBE2K Homo sapiens P61086 32814053
Intra
RBCK1 Q9BYM8 SYCE1 Homo sapiens Q8N0S2 25416956
Intra
RBCK1 Q9BYM8 SYCE1 Homo sapiens Q8N0S2 25416956
Intra
RBCK1 Q9BYM8 ENKD1 Homo sapiens Q9H0I2 32296183
Intra
RBCK1 Q9BYM8 NAA10 Homo sapiens P41227 25416956
Intra
RBCK1 Q9BYM8 NAA10 Homo sapiens P41227 25416956
Intra
RBCK1 Q9BYM8 IKBKG Homo sapiens Q9Y6K9 21455180
Cross
RBCK1 Q9BYM8 Socs6 Mus musculus Q9JLY0 16643902
Cross
RBCK1 Q9BYM8 Socs6 Mus musculus Q9JLY0 16643902
Cross
RBCK1 Q9BYM8 Socs6 Mus musculus Q9JLY0 16643902
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Polyglucosan Body Myopathy 1 With Or Without Immunodeficiency

PGBM1

Polyglucosan Body Myopathy Type 1

Polyglucosan Body Myopathy, Early-Onset, With Or Without Immunodeficiency

Pbmei

Autoinflammatory Syndrome With Pyogenic Bacterial Infection And Amylopectinosis

Polyglucosan Body Myopathy 1 Without Immunodeficiency

Polyglucosan Body Myopathy, Early-Onset, With/Without Immunodeficiency

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency

Glycogen Storage Disease Type Iv

Glycogenosis Type 4

Glycogenosis Type Iv

Amylopectinosis

Andersen Disease

Gsd Due To Glycogen Branching Enzyme Deficiency

Gsd Type 4

Gsd Type Iv

Glycogen Storage Disease Type 4

Glycogenosis Due To Glycogen Branching Enzyme Deficiency

Glycogen Storage Disease Iv

Gsd Iv

Glycogen Branching Enzyme Deficiency

Andersen Disease

Amylopectinosis

Glycogen Storage Disease Type Iv

GSD4

Brancher Deficiency

Glycogen Storage Disease, Type Iv

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Congenital Neuromuscular Form

Gbe1 Deficiency

Glycogenosis Iv

Cirrhosis, Familial, With Deposition Of Abnormal Glycogen

Glycogen Storage Disease Type 4

Glycogenosis 4

Potassium-Sensitive Periodic Paralysis, Ventricular Ectopy, And Dysmorphic Features

Andersen'S Disease

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Childhood Neuromuscular Form

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Fatal Perinatal Neuromuscular Form

Brancher Deficiency Glycogenosis

Branching-Transferase Deficiency Glycogenosis

Deficiency Of 1,4-Alpha-Glucan Branching Enzyme

Andersen-Tawil Syndrome

Gsd 4

Andersen Cardiodysrhythmic Periodic Paralysis

Lqt7

Long Qt Syndrome 7

Periodic Paralysis, Potassium-Sensitive Cardiodysrhythmic Type

Andersen Glycogenosis

Branching Enzyme Deficiency

Glycogenosis, Type Iv

Gsd Type Iv

Type Iv Glycogenosis

Gbe Deficiency, Childhood Neuromuscular Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Childhood Neuromuscular Form

Gsd Type 4, Childhood Neuromuscular Form

Gsdiv, Childhood Neuromuscular Form

Glycogen Storage Disease Type 4, Childhood Neuromuscular Form

Glycogen Storage Disease Type Iv, Childhood Neuromuscular Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Childhood Neuromuscular Form

Glycogenosis Type 4, Childhood Neuromuscular Form

Glycogenosis Type Iv, Childhood Neuromuscular Form

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Adult Neuromuscular Form

Gbe Deficiency, Adult Neuromuscular Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Adult Neuromuscular Form

Gsd Type 4, Adult Neuromuscular Form

Gsdiv, Adult Neuromuscular Form

Glycogen Storage Disease Type 4, Adult Neuromuscular Form

Glycogen Storage Disease Type Iv, Adult Neuromuscular Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Adult Neuromuscular Form

Glycogenosis Type 4, Adult Neuromuscular Form

Glycogenosis Type Iv, Adult Neuromuscular Form

Gbe Deficiency, Congenital Neuromuscular Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Congenital Neuromuscular Form

Gsd Type 4, Congenital Neuromuscular Form

Gsdiv, Congenital Neuromuscular Form

Glycogen Storage Disease Type 4, Congenital Neuromuscular Form

Glycogen Storage Disease Type Iv, Congenital Neuromuscular Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Congenital Neuromuscular Form

Glycogenosis Type 4, Congenital Neuromuscular Form

Glycogenosis Type Iv, Congenital Neuromuscular Form

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Childhood Combined Hepatic And Myopathic Form

Gbe Deficiency, Childhood Combined Hepatic And Myopathic Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Childhood Combined Hepatic And Myopathic Form

Gsd Type 4, Childhood Combined Hepatic And Myopathic Form

Gsdiv, Childhood Combined Hepatic And Myopathic Form

Glycogen Storage Disease Type 4, Childhood Combined Hepatic And Myopathic Form

Glycogen Storage Disease Type Iv, Childhood Combined Hepatic And Myopathic Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Childhood Combined Hepatic And Myopathic Form

Glycogenosis Type 4, Childhood Combined Hepatic And Myopathic Form

Glycogenosis Type Iv, Childhood Combined Hepatic And Myopathic Form

Gbe Deficiency, Fatal Perinatal Neuromuscular Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Fatal Perinatal Neuromuscular Form

Gsd Type 4, Fatal Perinatal Neuromuscular Form

Gsdiv, Fatal Perinatal Neuromuscular Form

Glycogen Storage Disease Type 4, Fatal Perinatal Neuromuscular Form

Glycogen Storage Disease Type Iv, Fatal Perinatal Neuromuscular Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Fatal Perinatal Neuromuscular Form

Glycogenosis Type 4, Fatal Perinatal Neuromuscular Form

Glycogenosis Type Iv, Fatal Perinatal Neuromuscular Form

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Non Progressive Hepatic Form

Gbe Deficiency, Non Progressive Hepatic Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Non Progressive Hepatic Form

Gsd Type 4, Non Progressive Hepatic Form

Gsdiv, Non Progressive Hepatic Form

Glycogen Storage Disease Type 4, Non Progressive Hepatic Form

Glycogen Storage Disease Type Iv, Non Progressive Hepatic Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Non Progressive Hepatic Form

Glycogenosis Type 4, Non Progressive Hepatic Form

Glycogenosis Type Iv, Non Progressive Hepatic Form

Glycogen Storage Disease Due To Glycogen Branching Enzyme Deficiency, Progressive Hepatic Form

Gbe Deficiency, Progressive Hepatic Form

Gsd Due To Glycogen Branching Enzyme Deficiency, Progressive Hepatic Form

Gsd Type 4, Progressive Hepatic Form

Gsdiv, Progressive Hepatic Form

Glycogen Storage Disease Type 4, Progressive Hepatic Form

Glycogen Storage Disease Type Iv, Progressive Hepatic Form

Glycogenosis Due To Glycogen Branching Enzyme Deficiency, Progressive Hepatic Form

Glycogenosis Type 4, Progressive Hepatic Form

Glycogenosis Type Iv, Progressive Hepatic Form

Glycogen Storage Disease 4

Gsd-Iv

Storage Disease, Glycogen, Type Iv

Incontinentia Pigmenti

Bloch-Sulzberger Syndrome

IP

Incontinentia Pigmenti, Familial Male-Lethal Type

Incontinentia Pigmenti Syndrome

Bloch-Siemens Syndrome

Ip2

Incontinentia Pigmenti, Type Ii, Formerly

Ip2, Formerly

Incontinentia Pigmenti Type 2

Bloch-Siemens-Sulzberger Syndrome

Familial Incontinentia Pigmenti Male-Lethal Type

Familial Incontinentia Pigmenti Type Ii

Incontinentia Pigmenti, Type Ii

Bloch Sulzberger Syndrome

Incontinentia Pigmenti Achromians

Incontinentia Pigmenti Of Bloch-Sulzberger

Nevus Pigmentosus Systematicus

Autoinflammation, Panniculitis, And Dermatosis Syndrome

Otulipenia

Otulin-Related Autoinflammatory Syndrome

AIPDS

Oras

Infantile-Onset Periodic Fever-Panniculitis-Dermatosis Syndrome

Autoinflammation, Panniculitis And Dermatosis Syndrome

Otulin Deficiency

Hepatitis B

Chronic Hepatitis B

Hepatitis B Infection

Serum Hepatitis

HBV

Hepatitis B Chronic

Hbv, Susceptibility To

Hepatitis B, Chronic

Chronic Hepatitis B Without Delta Agent

Chronic Hbv - [Hepatitis B Virus] Infection

Hepatitis B Nos

Chronic Type B Viral Hepatitis

Hep B Nos

Immunodeficiency 57 With Autoinflammation

Immunodeficiency 57

IMD57

Immune Dysregulation-Inflammatory Bowel Disease-Arthritis-Recurrent Infections-Lymphopenia Syndrome

Myopathy

Muscular Diseases

Myopathies

Familial Cold Autoinflammatory Syndrome 4

FCAS4

Nlrc4-Related Familial Cold Autoinflammatory Syndrome

Nlrc4-Related Familial Cold Urticaria

Autoinflammatory, Cold, Familial, Syndrome, Type 4

Immunodeficiency 11

Immunodeficiency 11a

Severe Combined Immunodeficiency Due To Card11 Deficiency

IMD11A

Imd11

Card11 Immunodeficiency

Scid Due To Card11 Deficiency

Card11 Deficiency

Immunodeficiency 11 A

Sideroblastic Anemia With B-Cell Immunodeficiency, Periodic Fevers, And Developmental Delay

SIFD

Congenital Sideroblastic Anemia-B-Cell Immunodeficiency-Periodic Fever-Developmental Delay Syndrome

Sifd Syndrome

Myoclonic Epilepsy Of Lafora

Lafora Disease

Epilepsy, Progressive Myoclonic 2b

EPM2

Melf

Epilepsy, Progressive Myoclonic 2a

Epm2a

Lafora'S Disease

Lafora Body Disease

Lbd

Epilepsy, Progressive Myoclonic, 2a

Lafora Progressive Myoclonic Epilepsy

Epilepsy Progressive Myoclonic 2

Lafora Body Disorder

Pme Type 2

Progressive Myoclonic Epilepsy Type 2

Progressive Myoclonus Epilepsy Type 2

Epilepsy, Progressive Myoclonic 2

Epm2b

Ld

Progressive Myoclonic Epilepsy 2

Progressive Myoclonic Epilepsy 2a

Progressive Myoclonic Epilepsy 2b

Progressive Myoclonic Epilepsy Lafora Type

Epilepsy, Myoclonic, Of Lafora

Frontometaphyseal Dysplasia

Fmd

Dysplasia, Frontometaphyseal

Dilated Cardiomyopathy

Familial Dilated Cardiomyopathy

Primary Dilated Cardiomyopathy

Idiopathic Dilated Cardiomyopathy

Congestive Cardiomyopathy

Idiopathic Dilation Cardiomyopathy

Primary Familial Dilated Cardiomyopathy

Cardiomyopathy, Dilated

DCM

Cardiomyopathy, Familial Dilated

Dilated Cardiomyopathy, Familial

Hypokinetic Dilated Cardiomyopathy, Familial

Familial Idiopathic Cardiomyopathy

Fdc

Cardiomyopathy, Familial Idiopathic

Idiopathic Cardiomegaly

Dilated Congestive Cardiomyopathy

Chronic Dilated Cardiomyopathy

Ccm - [Congestive Cardiomyopathy]

Cocm - [Congestive Cardiomyopathy]

Dcm - [Dilated Cardiomyopathy]

Dilated-Hypokinetic Cardiomyopathy

Congestive Idiopathic Cardiomyopathy

Primary Idiopathic Dilated Cardiomyopathy

Progressive Myoclonus Epilepsy

Pme

Progressive Myoclonic Epilepsy

Myoclonic Epilepsies, Progressive

Unverricht-Lundborg Syndrome

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus RBCK1 MGD MGI:1344372
Felis catus RBCK1 VGNC VGNC:81168
Macaca mulatta RBCK1 VGNC VGNC:81554
Canis familiaris RBCK1 VGNC VGNC:45397
Bos taurus RBCK1 VGNC VGNC:33776
Rattus norvegicus RBCK1 RGD RGD:708404
Others RBCK1 NCBI