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oligonucleotide labeling

" in MedChemExpress (MCE) Product Catalog:

122

Inhibitors & Agonists

80

Fluorescent Dye

1

Peptides

5

Isotope-Labeled Compounds

9

Click Chemistry

11

Oligonucleotides

Cat. No. Product Name Target Research Areas Chemical Structure
  • HY-15939

    Fluorescent Dye Metabolic Disease
    6-FAM SE (6-carboxyfluorescein succinimidyl ester) is a fluorescent labeling reagent. 6-FAM SE is used for oligonucleotide labeling and DNA sequencing .
    6-FAM SE
  • HY-D1086

    6-ROX, SE

    DNA Stain Others
    6-Carboxy-X-rhodamine, succinimidyl ester (6-ROX, SE) is a fluorescent dye for oligonucleotide labeling and automated DNA sequencing .
    6-Carboxy-X-rhodamine, succinimidyl ester
  • HY-D1070

    DNA Stain Others
    DBCO-PEG4-TAMRA is a PEG-based TAMRA dye and contains a DBCO group, which enables Click Chemistry. The TAMRA dye is a dye widely used in oligonucleotide labeling and automated DNA sequencing applications. DBCO-PEG4-TAMRA is a click chemistry reagent, it contains a DBCO group that can undergo strain-promoted alkyne-azide cycloaddition (SPAAC) with molecules containing Azide groups.
    DBCO-PEG4-TAMRA
  • HY-66021
    6-FAM
    2 Publications Verification

    6-Carboxyfluorescein

    Fluorescent Dye Others
    6-FAM (6-Carboxyfluorescein) is an isomer of carboxyfluorescein and is mainly used for sequencing and labeling of nucleic acids.
    6-FAM
  • HY-D1410

    DMTr-4'-F-5-Methyluridine-CED phosphoramidite

    Fluorescent Dye Others
    DMTr-4'-F-5-Me-U-CED phosphoramidite (DMTr-4'-F-5-Methyluridine-CED phosphoramidite), a dye reagent for oligonucleotide labeling, acts as efficient as the incorporation of native deoxyribonucleoside phosphoramidites. DMTr-4'-F-5-Me-U-CED phosphoramidite is a building block .
    DMTr-4'-F-5-Me-U-CED phosphoramidite
  • HY-D1409

    DMTr-4'-F-uridine-CED-TBDMS phosphoramidite

    DNA Stain Cardiovascular Disease
    DMTr-4'-F-U-CED-TBDMS phosphoramidite (DMTr-4'-F-uridine-CED-TBDMS phosphoramidite), a dye reagent for oligonucleotide labeling, can be used for the research of applications in RNA therapeutics, RNA aptamers, and ribozymes for elucidating RNA structure. DMTr-4'-F-U-CED-TBDMS phosphoramidite represents a probe with wide utility for elucidation of RNA structure .
    DMTr-4'-F-U-CED-TBDMS phosphoramidite
  • HY-D1408

    DMTr-4'-Methyluridine-CED-TBDMS phosphoramidite

    DNA Stain Cardiovascular Disease
    DMTr-4'-Me-U-CED-TBDMS phosphoramidite (DMTr-4'-Methyluridine-CED-TBDMS phosphoramidite), a dye reagent for oligonucleotide labeling, can be used for the research of applications in RNA therapeutics, RNA aptamers, and ribozymes for elucidating RNA structure. DMTr-4'-Me-U-CED-TBDMS phosphoramidite represents a probe with wide utility for elucidation of RNA structure .
    DMTr-4'-Me-U-CED-TBDMS phosphoramidite
  • HY-D2244

    Fluorescent Dye Others
    Cy3 phosphoramidite?is a fluorescent dye for oligonucleotide labeling.
    Cy3 phosphoramidite
  • HY-130510

    Fluorescent Dye Others
    6-HEX dipivaloate is an amino-bindable fluorescent probe that can be used to label peptides and oligonucleotides. 6-HEX dipivaloate is widely used in nucleic acid sequencing and related research .
    6-HEX dipivaloate
  • HY-D1411

    DMTr-4'-CF3-5-Methyluridine-CED phosphoramidite

    DNA Stain Others
    DMTr-4'-CF3-5-Me-U-CED phosphoramidite (DMTr-4'-CF3-5-Methyluridine-CED phosphoramidite), the modified oligodeoxynucleotide (ODN), is a dye reagent for oligonucleotide labeling, can be used for the research of applications in RNA research .
    DMTr-4'-CF3-5-Me-U-CED phosphoramidite
  • HY-D0053

    6-Carboxy-X-rhodamine

    Fluorescent Dye Others
    6-ROX is a selective fluorescent probe and potential inhibitor of COX-2. 6-ROX binds to the active site of COX-2 and inhibits its conversion of arachidonic acid into prostaglandins. 6-ROX is often used in the field of optical imaging related to tumors and inflammation, and helps detect diseased tissues with high expression of COX-2 .
    6-ROX
  • HY-D0049
    6-TAMRA-SE
    1 Publications Verification

    6-TAMRA-NHS ester; 6-Carboxytetramethylrhodamine N-succinimidyl ester

    DNA Stain Others
    6-TAMRA-SE (6-TAMRA-NHS ester) is a fluorescent dye carrying the amine reactive group. 6-TAMRA-SE is one of the traditional fluorophores used for automated DNA sequencing .
    6-TAMRA-SE
  • HY-D0913
    1-Methyl-7-nitroisatoic anhydride
    2 Publications Verification

    1M7

    Fluorescent Dye Others
    1-Methyl-7-nitroisatoic anhydride (1M7) is a reagent that detects local nucleotide flexibility, for probing 2'-hydroxyl reactivity, can be used for RNA structure analysis .
    1-Methyl-7-nitroisatoic anhydride
  • HY-D0784
    5-ROX
    1 Publications Verification

    5-Carboxy-X-rhodamine

    Fluorescent Dye Others
    5-ROX (5-Carboxy-X-rhodamine), a rhodamine dye, exhibits strong fluorescence property in aqueous buffer with the λexit of 580 nm (ε=3.6×10 4 M -1 cm -1), and λemit of 604 nm (=0.94) .
    5-ROX
  • HY-D0043
    5(6)-ROX
    1 Publications Verification

    5(6)-Carboxy-X-rhodamine

    DNA Stain Others
    5(6)-ROX (5(6)-Carboxy-X-rhodamine) is a nucleic acid fluorescent label which can be used as a reference dye for real-time polymerase chain reaction (Em/Ex = 605/585 nm) .
    5(6)-ROX
  • HY-D2502

    Fluorescent Dye Others
    Cy7 hydrazide is a Cy7 (HY-D0825) dye derivative with hydrazine functionality. The hydrazide group of Cy7 hydrazide can form hydrazinone coupling with molecules containing aldehydes or ketones to form covalent bonds .
    Cy7 hydrazide
  • HY-D0723
    5(6)-TAMRA SE
    2 Publications Verification

    5(6)-Carboxytetramethylrhodamine N-succinimidyl ester

    Fluorescent Dye Cancer
    5(6)-TAMRA SE is a fluorescent dye that emits red fluorescence. 5(6)-TAMRA SE binds to oligonucleotides and is used in DNA sequencing. 5(6)-TAMRA SE can be used in cancer research (Ex/Em = 565/580 nm) .
    5(6)-TAMRA SE
  • HY-157221

    Nucleoside Antimetabolite/Analog Others
    Biotin-16-dGTP tetralithium is a Biotin labeled dGTP, and can be used to label oligonucleotides .
    Biotin-16-dGTP tetralithium
  • HY-P0030

    Fluorescent Dye Others
    5-Tamra-DRVYIHP i a Peptide with TAMRA labeling oligonucleotide.
    5-Tamra-DRVYIHP
  • HY-D2245

    Fluorescent Dye Others
    Cy5.5 phosphoramidite, a cyanine derivative, is a fluorescent labeling reagent for preparing fluorescence-labeled oligonucleotides .
    Cy5.5 phosphoramidite
  • HY-D1756

    Fluorescent Dye Others
    ROX NHS ester, 6-isomer is a highly fluorescent, and photostable rhodamine dye for various applications. ROX labeled oligonucleotide probes are often used in qPCR, and qPCR instruments have ROX channel. This is reactive dye for the labeling of amino-groups in peptides, proteins, and amino-oligonucleotides. Pure single isomer.
    ROX NHS ester, 6-isomer
  • HY-D1892

    Fluorescent Dye Others
    6-Hexachloro-fluorescein phosphoramidite is a fluorescent probe that can be used for oligonucleotide labeling .
    6-Hexachloro-fluorescein phosphoramidite
  • HY-D2495

    Fluorescent Dye Others
    Cy7 SE (nosulfo) is a fluorescent dye for the labeling of amino-groups in peptides, proteins, and oligonucleotides.
    Cy7 SE (nosulfo)
  • HY-135414
    Cyanine5 NHS ester chloride
    1 Publications Verification

    Fluorescent Dye Others
    Cyanine5 NHS ester chloride is a red emitting fluorescent dye for labeling of amino-groups in peptides, proteins, and oligonucleotides .
    Cyanine5 NHS ester chloride
  • HY-D1901

    Fluorescent Dye Others
    FAM-dT phosphoramidite (Compound 21) is a fully protected labelled nucleoside phosphoramidite that can be incorporated into oligonucleotides .
    FAM-dT phosphoramidite
  • HY-D0819A
    CY5-SE triethylamine salt
    Maximum Cited Publications
    25 Publications Verification

    Cy5 NHS Ester triethylamine salt; Sulfo-Cyanine5 Succinimidyl Ester triethylamine salt

    Fluorescent Dye Others
    Cy5-SE (Cy5 NHS Ester) triethylamine salt is a reactive dye for the labeling of amino-groups in peptides, proteins, and oligonucleotides. Cy5-SE triethylamine salt is ideal for very cost-efficient labeling of soluble proteins, as well as all kinds of peptides and oligonucleotides Ex=649 nm; Em=670 nm) .
    CY5-SE triethylamine salt
  • HY-D0819
    CY5-SE
    Maximum Cited Publications
    25 Publications Verification

    Cy5 NHS Ester; Sulfo-Cyanine5 Succinimidyl Ester

    Fluorescent Dye Others
    Cy5-SE (Cy5 NHS Ester) is a reactive dye for the labeling of amino-groups in peptides, proteins, and oligonucleotides. This dye requires small amount of organic co-solvent (such as DMF or DMSO) to be used in labeling reaction. This reagent is ideal for very cost-efficient labeling of soluble proteins, as well as all kinds of peptides and oligonucleotides. This reagent also works well in organic solvents for small molecule labeling. Excitation (nm):649, Emission (nm): 670.
    CY5-SE
  • HY-135414B

    Fluorescent Dye Others
    Cyanine5 NHS ester iodide is a red emitting fluorescent dye for labeling of amino-groups in peptides, proteins, and oligonucleotides .
    Cyanine5 NHS ester iodide
  • HY-D1089

    Fluorescent Dye Others
    6-JOE, SE is an amine-reactive fluorescent probe and is suitable for postsynthetic labeling of amino-modified oligonucleotides .
    6-JOE, SE
  • HY-D1893

    Fluorescent Dye Others
    HEX azide, 6-isomer, a derivate of fluorescent dye hexachlorofluorescein (HEX), can be used for labeling oligonucleotides .
    HEX azide, 6-isomer
  • HY-D1897

    5′-Tetrachlorofluorescein phosphoramidite

    Fluorescent Dye Others
    6-TET phosphoramidite (5′-Tetrachlorofluorescein phosphoramidite) is a fluorescent dye that can be used for labeling an oligonucleotide with fluorescein .
    6-TET phosphoramidite
  • HY-D1221

    Fluorescent Dye Others
    6-Fluorescein phosphoramidite is a potent fluorescent dye. 6-Fluorescein phosphoramidite can be used to label oligonucleotides .
    6-Fluorescein phosphoramidite
  • HY-149906A

    FITC-GEM91 sodium

    HIV Infection
    FITC-Trecovirsen (sodium) is a FITC labeled Trecovirsen. Trecovirsen is a 25-mer antisense phosphorothioate oligonucleotide targeted at the gag site of the HIV gene .
    FITC-Trecovirsen sodium
  • HY-D145729F

    Fluorescent Dye STAT Cancer
    FAM-Danvatirsen is a FAM-labeled Danvatirsen (HY-145729). Danvatirsen is an antisense oligonucleotide targeting STAT3 that can be used in the study of cancer .
    FAM-Danvatirsen
  • HY-172398

    Fluorescent Dye Others
    FAM phosphoramidite, 5-isomer is a standard fluorescein (FAM) phosphoramidite for 5'-terminal oligonucleotide labeling, high isomeric purity single isomer.
    FAM phosphoramidite, 5-isomer
  • HY-D2746

    Fluorescent Dye Others
    Cy5.5 bis-NHS ester is a reactive cyanine dye containing NHS ester which can be used to label amine groups in peptides, proteins, and oligonucleotides.
    Cy5.5 bis-NHS ester
  • HY-135414A

    Fluorescent Dye Others
    Cyanine5 NHS ester bromide is a active compound, can be used to label amino groups in peptides, proteins, and oligonucleotides. Cyanine5 NHS ester bromide is a cyanine dye, fluorescence-labeling neurotensin (8-13) via arginine residues .
    Cyanine5 NHS ester bromide
  • HY-150237

    DNA/RNA Synthesis Dystrophin Others
    FITC-labeled Drisapersen (sodium) is Drisapersen labeled with FITC. Drisapersen, a antisense oligonucleotide, induces exon 51 skipping during dystrophin pre-mRNA splicing and allows synthesis of partially functional dystrophin in Duchenne muscular dystrophy (DMD) patients with amenable mutations.
    FITC-labeled Drisapersen sodium
  • HY-W744780

    Biochemical Assay Reagents Others
    Docosahexaenoic Acid N-Succinimide is the succinimide analog of Docosahexaenoic Acid. The NHS ester can be used to label the primary amines (-NH2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules.
    Docosahexaenoic acid N-succinimide
  • HY-D1900

    Fluorescent Dye Others
    VIC azide, 6-isomer is a VIC derivative that can be used for conjugating VIC to other molecules. VIC can be used for labeling oligonucleotides at the 5’-end .
    VIC azide, 6-isomer
  • HY-D1899

    Fluorescent Dye Others
    VIC phosphoramidite, 6-isomer is a VIC derivative that can be used for conjugating VIC to other molecules. VIC can be used for labeling oligonucleotides at the 5’-end .
    VIC phosphoramidite, 6-isomer
  • HY-150751A

    Toll-like Receptor (TLR) Inflammation/Immunology
    Biotin-labeled ODN TTAGGG (sodium), a inhibitory oligonucleotide (ODN), is a TLR9, AIM2 and cGAS antagonist. Biotin-labeled ODN TTAGGG (sodium) can be used to evaluate CpG ODN cellular uptake and localization using a biotin detection system and light microscopy.
    Biotin-labeled ODN TTAGGG sodium
  • HY-W190937

    Biochemical Assay Reagents Others
    PC Azido-PEG3-NHS carbonate ester is a photocleavable linker. It can be used to label the primary amines (-NH2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules.
    PC Azido-PEG3-NHS carbonate ester
  • HY-D2096

    Fluorescent Dye Others
    Alexa fluor 647 NHS ester can be used to label Alexa fluor 647 to the primary amines (R-NH2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules .
    Alexa fluor 647 NHS ester
  • HY-150751B

    Toll-like Receptor (TLR) Inflammation/Immunology
    FITC-labeled ODN TTAGGG (sodium), a inhibitory oligonucleotide (ODN), is a TLR9, AIM2 and cGAS antagonist. FITC-labeled ODN TTAGGG (sodium) can be used to evaluate CpG ODN cellular uptake and localization by confocal laser-scanning microscopy (excitation 495 nm, emission 520 nm) or flow cytometry.
    FITC-labeled ODN TTAGGG sodium
  • HY-D2096A

    Fluorescent Dye Others
    Alexa fluor 647 NHS ester TEA can be used to label Alexa fluor 647 to the primary amines (R-NH2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules .
    Alexa fluor 647 NHS ester TEA
  • HY-W800819

    Biochemical Assay Reagents Others
    Arachidic Acid N-Hydroxysuccinimide Ester is a lipid comprised of a saturated fatty acid with a 20-carbon chain with a terminal NHS ester. The NHS ester can be used to label the primary amines (-NH2) of proteins, amine-modified oligonucleotides, and other amine-containing molecules.
    Arachidic acid N-hydroxysuccinimide ester
  • HY-172284

    Fluorescent Dye Others
    6-TAMRA cadaverine has achieved prominence as a dye for oligonucleotide labeling and automated DNA sequencing applications. The amino group (NH2) is reactive with carboxylic acids, activated NHS esters, carbonyls (ketone, aldehyde), etc.
    6-TAMRA cadaverine
  • HY-149117

    Fluorescent Dye Others
    AF430 NHS ester is an AF 430 maleimide is a derivative of the yellow fluorescent dye AF 430. AF430 has an excitation wavelength of 425 nm and an emission wavelength of 542 nm. AF430 NHS ester can be uesd for the labeling of amino-groups in peptides, proteins, and oligonucleotides. To achieve specific coupling of dye labels and biomolecules .
    AF430 NHS ester
  • HY-151680

    DNA Stain Others
    TAMRA alkyne, 6-isomer is a linker of TAMRA which is a xanthene dye with orange emission that is commonly used for oligonucleotide labeling and amino acid sequencing. The addition of the alkyne groups allows for it to be reacted with an azide for copper-catalyzed Click Chemistry .
    TAMRA alkyne, 6-isomer

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