1. Gene
  2. SNAP29 - synaptosome associated protein 29 Gene

SNAP29 - synaptosome associated protein 29 Gene

Homo sapiens

Also known as CEDNIK; SNAP-29

Gene ID: 9342 | Gene type: protein coding

About SNAP29

Cytogenetic location: 22q11.21 Genomic coordinates (GRCh38): 22:20,859,007-20,891,214 (from NCBI)

This gene has 3 transcripts (splice variants), 201 orthologues, 3 paralogues and is associated with 3 phenotypes. Ubiquitous expression in testis (RPKM 9.3), brain (RPKM 8.1) and 25 other tissues.

Summary

This gene, a member of the SNAP25 gene family, encodes a protein involved in multiple membrane trafficking steps. Two Other members of this gene family, SNAP23 and SNAP25, encode proteins that bind a syntaxin protein and mediate synaptic vesicle membrane docking and fusion to the plasma membrane. The protein encoded by this gene binds tightly to multiple syntaxins and is localized to intracellular membrane structures rather than to the plasma membrane. While the protein is mostly membrane-bound, a significant fraction of it is found free in the cytoplasm. Use of multiple polyadenylation sites has been noted for this gene. [provided by RefSeq, Jul 2008]

SNAP29 Products(1)

mRNA Protein Name
NM_004782.4 NP_004773.1 synaptosomal-associated protein 29
Gene Ontology
  • Molecular Function
  • Biological Process
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
21988832 GOA
Biological Process GO Annotation Evidence Reference Source
involved in autophagosome maturation IMP
IMP: Inferred from mutant phenotype
23217709 GOA
involved in autophagosome membrane docking IDA
IDA: Inferred from direct assay
25686604 GOA
involved in cilium assembly IMP
IMP: Inferred from mutant phenotype
25686250 GOA
Cellular Component GO Annotation Evidence Reference Source
part of SNARE complex IDA
IDA: Inferred from direct assay
23217709 GOA
located in ciliary pocket membrane IDA
IDA: Inferred from direct assay
25686250 GOA
located in cytoplasm IDA
IDA: Inferred from direct assay
25468996 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

SNAP29 Protein Structure

V-SNARE_C

V-SNARE_C: Snare region anchored in the vesicle membrane C-terminus (62 - 113)

SNAP-25

SNAP-25: SNAP-25 family (142 - 196)

SNARE

SNARE: SNARE domain (203 - 257)

  • 0
  • 100
  • 200
  • 258 a.a.
Protein Preferred Names Protein Names

synaptosomal-associated protein 29

cerebral dysgenesis, neuropathy, ichthyosis and keratoderma syndrome

SNAP29 Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
SNAP29 O95721 FAM9B Homo sapiens Q8IZU0
Y2H Array
25416956
Intra
SNAP29 O95721 FAM9B Homo sapiens Q8IZU0
Validated Y2H
25416956
Intra
SNAP29 O95721 FAM9B Homo sapiens Q8IZU0
Y2H Prey Pooling
25416956
Intra
SNAP29 O95721 VAMP4 Homo sapiens O75379-2
Y2H Prey Pooling
25416956
Intra
SNAP29 O95721 VAMP5 Homo sapiens O95183
Y2H Prey Pooling
25416956
Intra
SNAP29 O95721 VAMP5 Homo sapiens O95183
Validated Y2H
25416956
Intra
SNAP29 O95721 VAMP5 Homo sapiens O95183
Y2H Array
25416956
Intra
SNAP29 O95721 VAMP1 Homo sapiens P23763
Y2H Array
25416956
Intra
SNAP29 O95721 STX2 Homo sapiens P32856-2
Validated Y2H
32296183
Intra
SNAP29 O95721 STX3 Homo sapiens Q13277
Validated Y2H
32296183
Intra
SNAP29 O95721 TXNRD3NB Homo sapiens Q6F5E7
Y2H Array
32296183
Intra
SNAP29 O95721 TXNRD3NB Homo sapiens Q6F5E7
Validated Y2H
32296183
Intra
SNAP29 O95721 TXNRD3NB Homo sapiens Q6F5E7
Y2H Prey Pooling
32296183
Intra
SNAP29 O95721 STX12 Homo sapiens Q86Y82
Y2H
26359495
Intra
SNAP29 O95721 STX6 Homo sapiens O43752
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 STX17 Homo sapiens P56962
Pull Down
25419848
Intra
SNAP29 O95721 STX17 Homo sapiens P56962
Confocal
23217709
Intra
SNAP29 O95721 STX17 Homo sapiens P56962
Anti Tag CoIP
23217709
Intra
SNAP29 O95721 STX17 Homo sapiens P56962
Anti Tag CoIP
25419848
Intra
SNAP29 O95721 STX17 Homo sapiens P56962
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 FAM9C Homo sapiens Q8IZT9
Y2H Prey Pooling
32296183
Intra
SNAP29 O95721 FAM9C Homo sapiens Q8IZT9
Validated Y2H
32296183
Intra
SNAP29 O95721 FAM9C Homo sapiens Q8IZT9
Y2H Array
32296183
Intra
SNAP29 O95721 TRAF3 Homo sapiens Q13114
Validated Y2H
32296183
Intra
SNAP29 O95721 TRAF3 Homo sapiens Q13114
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 TRAF3 Homo sapiens Q13114
Anti Tag CoIP
28514442
Intra
SNAP29 O95721 COG6 Homo sapiens Q9Y2V7
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 COG6 Homo sapiens Q9Y2V7
Validated Y2H
32296183
Intra
SNAP29 O95721 COG6 Homo sapiens Q9Y2V7
Y2H Array
32296183
Intra
SNAP29 O95721 COG6 Homo sapiens Q9Y2V7
Y2H Prey Pooling
32296183
Intra
SNAP29 O95721 NAPB Homo sapiens Q9H115
Y2H Prey Pooling
32296183
Intra
SNAP29 O95721 NAPB Homo sapiens Q9H115
Y2H Array
32296183
Intra
SNAP29 O95721 NAPB Homo sapiens Q9H115
Validated Y2H
32296183
Intra
SNAP29 O95721 HTT Homo sapiens P42858
Y2H Pooling
32814053
Intra
SNAP29 O95721 HTT Homo sapiens P42858
Validated Y2H
32814053
Intra
SNAP29 O95721 HTT Homo sapiens P42858
Y2H Array
32814053
Intra
SNAP29 O95721 EHD1 Homo sapiens Q9H4M9
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 EHD1 Homo sapiens Q9H4M9
Validated Y2H
32296183
Intra
SNAP29 O95721 VAMP2 Homo sapiens P63027
Y2H Array
25416956
Intra
SNAP29 O95721 VAMP2 Homo sapiens P63027
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 VAMP2 Homo sapiens P63027
Validated Y2H
25416956
Intra
SNAP29 O95721 VAMP3 Homo sapiens Q15836
Validated Y2H
32296183
Intra
SNAP29 O95721 VAMP3 Homo sapiens Q15836
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 VAMP8 Homo sapiens Q9BV40
Pull Down
25419848
Intra
SNAP29 O95721 VAMP8 Homo sapiens Q9BV40
Anti Tag CoIP
23217709
Intra
SNAP29 O95721 VAMP8 Homo sapiens Q9BV40
Anti Tag CoIP
25419848
Intra
SNAP29 O95721 VAMP8 Homo sapiens Q9BV40
Anti Tag CoIP
33961781
Intra
SNAP29 O95721 VAMP8 Homo sapiens Q9BV40
Anti Tag CoIP
33947832
Intra
SNAP29 O95721 NTAQ1 Homo sapiens Q96HA8
Validated Y2H
32296183
Intra
SNAP29 O95721 STX1B Homo sapiens P61266
Validated Y2H
32296183
Intra
SNAP29 O95721 RASSF7 Homo sapiens Q02833
Y2H
21988832
Intra
SNAP29 O95721 ATXN1 Homo sapiens P54253
Validated Y2H
32814053
Intra
SNAP29 O95721 ATXN1 Homo sapiens P54253
Y2H Array
32814053
Intra
SNAP29 O95721 ATXN1 Homo sapiens P54253
Y2H Pooling
32814053
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Cerebral Dysgenesis, Neuropathy, Ichthyosis, And Palmoplantar Keratoderma Syndrome

Cednik Syndrome

CEDNIK

Cerebral Dysgenesis, Neuropathy, Ichthyosis And Keratoderma Syndrome

Cerebral Dysgenesis, Neuropathy, Ichthyosis, And Palmoplantar Keratoderma Syndro

Cerebral Dysgenesis-Neuropathy-Ichthyosis-Palmoplantar Keratoderma Syndrome

Cerebral Dysgenesis-Neuropathy-Ichthyosis-Keratoderma Syndrome

Cerebral Dysgenesis, Neuropathy, Ichthyosis, And Palmoplantar Keratoderma

Neurocutaneous Syndromes

Leukodystrophy, Hypomyelinating, 2

Pmld1

Hypomyelinating Leukodystrophy 2

HLD2

Pelizaeus-Merzbacher-Like Disease 1

Pelizaeus-Merzbacher-Like Disease Due To Gjc2 Mutation

Pelizaeus-Merzbacher-Like Disease Type 1

Pelizaeus-Merzbacher-Like Disease, 1

Pelizaeus Merzbacher Like Disease

Pelizaeus-Merzbacher-Like Disease

Pmld - Pelizaeus Merzbacher Like Disease

Pelizaeus-Merzbacher-Like Disease Autosomal Recessive Type 1

Pmldar1

Leukodystrophy, Hypomyelinating, Type 2

Ichthyosis

Ichthyoses

Non-Syndromic Ichthyosis

Congenital Ichthyosis

Neuropathy

Peripheral Neuropathy

Peripheral Neuropathies

Acute Flaccid Myelitis
Van Den Ende-Gupta Syndrome

VDEGS

Blepharophimosis, Arachnodactyly, And Congenital Contractures

Marden-Walker-Like Syndrome

Marden-Walker-Like Syndrome Without Psychomotor Retardation

Marden Walker Like Syndrome

Marden-Walker-Like Syndrome Without Psychmotor Retardation

Van Den Ende Gupta Syndrome

Marden Walker Like Syndrome Without Psychomotor Retardation

Blepharophimosis Arachnodactyly And Congenital Contractures

Vici Syndrome

Absent Corpus Callosum Cataract Immunodeficiency

VICIS

Immunodeficiency With Cleft Lip/Palate, Cataract, Hypopigmentation, And Absent Corpus Callosum

Dionisi Vici Sabetta Gambarara Syndrome

Immunodeficiency With Cleft Lip/Palate, Cataract, Hypopigmentation And Absent Corpus Callosum

Corpus Callosum Agenesis-Cataract-Immunodeficiency Syndrome

Dionisi-Vici-Sabetta-Gambarara Syndrome

Immunodeficiency With Cleft Lip/Palate Cataract Hypopigmentation And Absent Corpus Callosum

Klippel-Feil Syndrome 4
Mental Retardation, Enteropathy, Deafness, Peripheral Neuropathy, Ichthyosis, And Keratoderma

Mednik Syndrome

Erythrokeratodermia Variabilis 3

MEDNIK

Ekv3

Erythrokeratodermia Variabilis, Kamouraska Type

Mental Retardation, Enteropathy, Deafness, Neuropathy, Ichthyosis, Keratodermia

Intellectual Disability-Enteropathy-Deafness-Peripheral Neuropathy-Ichthyosis-Keratodermia Syndrome

Intellectual Disability-Enteropathy-Hearing Loss-Peripheral Neuropathy-Ichthyosis-Keratodermia Syndrome

Intellectual Disability, Enteropathy, Deafness, Peripheral Neuropathy, Ichthyosis, And Keratoderma

Erythrokeratodermia Variabilis Kamouraska Type

Mental Retardation, Enteropathy, Deafness, Peripheral Neuropathy, Ichthyosis, Keratoderma

Heparin Cofactor Ii Deficiency

Thrombophilia Due To Heparin Cofactor Ii Deficiency

THPH10

Hcf Ii Deficiency

Hcf2 Deficiency

Thrombophilia 10 Due To Heparin Cofactor Ii Deficiency

Hcf 2 Deficiency

Thrombophilia Due To Heparin Cofactor 2 Deficiency

Thrombophilia, Due To Heparin Cofactor Ii Deficiency

Chromosome 22q11.2 Deletion Syndrome, Distal

22q11.2 Deletion Syndrome

Autosomal Dominant Opitz G/Bbb Syndrome

Catch22

Cayler Cardiofacial Syndrome

Conotruncal Anomaly Face Syndrome

Digeorge Syndrome

Sedlackova Syndrome

Shprintzen Syndrome

Velocardiofacial Syndrome

22q11.2 Distal Deletion Syndrome

Distal 22q11.2 Microdeletion Syndrome

22q11.2ds

Vcfs

Velo-Cardio-Facial Syndrome

Distal Chromosome 22q11.2 Deletion Syndrome

Chromosome 22q11.2 Deletion Syndrome Distal

Chromosome 22q11.2 Deletion Syndrome

Deletion 22q11.2 Syndrome

22q11ds

Catch 22

Digeorge Sequence

Microdeletion 22q11.2

Monosomy 22q11

Takao Syndrome

Distal Del(22)(Q11.2)

Distal Monosomy 22q11.2

Catch 22 Syndrome

Chromosome Deletion Syndrome 22q11.2, Distal

Velocardiofacial Syndrome

Shprintzen Syndrome

VCFS

Chromosome 22q11.2 Deletion Syndrome

Vcf Syndrome

Shprintzen Vcf Syndrome

Vcf-Velocardiofacial Syndrome

Velo-Cardio-Facial Syndrome

Digeorge Syndrome

22q11 Deletion Syndrome

Conotruncal Anomaly Face Syndrome

Neuropathy, Congenital Hypomyelinating, 1, Autosomal Recessive

Charcot-Marie-Tooth Disease Type 4

Charcot-Marie-Tooth Disease Type 4e

Hereditary Motor And Sensory Neuropathy

Cmt4e

CHN1

Hypomyelinating Neuropathy, Congenital, 1

Charcot-Marie-Tooth Neuropathy Type 4e

Neuropathy, Congenital Hypomyelinating, 1

Ar-Cmt1

Autosomal Recessive Demyelinating Charcot-Marie-Tooth

Cmt4

Neuropathy, Congenital Hypomyelinating Or Amyelinating, Autosomal Recessive

Hypomyelination, Severe Congenital

Charcot-Marie-Tooth Disease, Type 4e

Charcot-Marie-Tooth Neuropathy, Type 4e

Autosomal Recessive Congenital Hypomyelinating Or Amyelinating Neuropathy

Autosomal Recessive Congenital Hypomyelinating Neuropathy

Congenital Amyelinating Neuropathy

Congenital Hypomyelinating Neuropathy Autosomal Recessive

Neuropathy, Congenital Hypomyelinating Or Amyelinating

Severe Congenital Hypomyelination

Hereditary Sensory Motor Neuropathy

Charcot-Marie-Tooth Disease, Demyelinating, Autosomal Recessive

Neuropathy, Hypomyelinating, Congenital, Type 1

Neuropathy, Motor And Sensory, Hereditary

Congenital Hypomyelinating Neuropathy

Hereditary Motor And Sensory Neuropathies

Hereditary Sensorimotor Neuropathy

Hmsn - [Hereditary Motor And Sensory Neuropathy]

Hsmn - [Hereditary Sensory And Motor Neuropathy]

Hereditary Motor And Sensory Neuropathy, Types I-Iv

Tetralogy Of Fallot

TOF

Fallot Tetralogy

Ventricular Septal Defect With Pulmonary Stenosis Or Atresia, Dextraposition Of Aorta, And Hypertrophy Of Right Ventricle

Tetrad Of Fallot

Fallot Tetrad

Fallot Disease

Fallot Complex

Subpulmonic Stenosis, Ventricular Septal Defect, Overriding Aorta, And Right Ventricular Hypertrophy

Interventricular Septal Defect With Dextroposition Of Aorta, Pulmonary Stenosis And Hypertrophy Of Right Ventricle

Interventricular Septal Defect, In Tetralogy Of Fallot

Ventricular Septal Defect With Obstructed Right Ventricular Outflow

Tof - [Tetralogy Of Fallot]

Pulmonary Atresia With Ventricular Septal Defect [Fallot Type]

Pulmonary Atresia, Ventricular Septal Defect And Mapcas

Pulmonary Atresia With Ventricular Septal Defect And Systemic-To-Pulmonary Collateral Arteries [Fallot Type]

Congenital Nervous System Abnormality

Congenital Neurologic Anomaly

Congenital Nervous System Disorder

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus SNAP29 MGD MGI:1914724
Rattus norvegicus SNAP29 RGD RGD:620225
Bos taurus SNAP29 VGNC VGNC:35052
Canis familiaris SNAP29 VGNC VGNC:46589
Macaca mulatta SNAP29 VGNC VGNC:77664