1. Gene
  2. RALY - RALY heterogeneous nuclear ribonucleoprotein Gene

RALY - RALY heterogeneous nuclear ribonucleoprotein Gene

Homo sapiens

Also known as P542; HNRPCL2

Gene ID: 22913 | Gene type: protein coding

About RALY

Cytogenetic location: 20q11.22 Genomic coordinates (GRCh38): 20:33,993,911-34,084,884 (from NCBI)

This gene has 10 transcripts (splice variants), 203 orthologues and 6 paralogues. Ubiquitous expression in bone marrow (RPKM 18.7), testis (RPKM 18.3) and 25 other tissues.

Summary

This gene encodes a member of the heterogeneous nuclear ribonucleoprotein (hnRNP) gene family. This protein may play a role in pre-mRNA splicing and in embryonic development. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2011]

RALY Products(2)

mRNA Protein Name
NM_007367.4 NP_031393.2 RNA-binding protein Raly isoform 2
NM_016732.3 NP_057951.1 RNA-binding protein Raly isoform 1
Gene Ontology
  • Molecular Function
  • Cellular Component
Molecular Function GO Annotation Evidence Reference Source
enables protein binding IPI
IPI: Inferred from physical interaction
22365833 GOA
Cellular Component GO Annotation Evidence Reference Source
part of catalytic step 2 spliceosome IDA
IDA: Inferred from direct assay
11991638 GOA
located in nucleus IDA
IDA: Inferred from direct assay
22720776 GOA
EXP: Inferred from Experiment IDA: Inferred from direct assay IPI: Inferred from physical interaction IMP: Inferred from mutant phenotype IGI: Inferred from genetic interaction IEP: Inferred from expression pattern

RALY Protein Structure

RRM_1

RRM_1: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (23 - 85)

  • 0
  • 100
  • 200
  • 306 a.a.
Protein Preferred Names Protein Names

RNA-binding protein Raly

RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog)

RALY Protein-protein interaction Information

Type
Protein Name Protein ID Interactor Interactor Species Interactor ID Detection Method Reference
Intra
RALY Q9UKM9 HNRNPC Homo sapiens P07910
Crosslink
30021884
Intra
RALY Q9UKM9 HNRNPC Homo sapiens P07910
Y2H
22365833
Intra
RALY Q9UKM9 HNRNPC Homo sapiens P07910
Anti Tag CoIP
33961781
Intra
RALY Q9UKM9 FUS Homo sapiens P35637
PLA
30354839
Intra
RALY Q9UKM9 FUS Homo sapiens P35637
IF
30354839
Intra
RALY Q9UKM9 FUS Homo sapiens P35637
Anti Tag CoIP
30354839
Intra
RALY Q9UKM9 HNRNPCL2 Homo sapiens B2RXH8
Crosslink
30021884
Cross: Cross-species interaction Intra: Intraspecies interaction

Related Diseases

Diseases Alias
Skin Carcinoma In Situ

Carcinoma In Situ Of Skin

Cutaneous Carcinoma In Situ

Bardet-Biedl Syndrome 1

BBS1

Bardet-Biedl Syndrome 1, Modifier Of

Bardet-Biedl Syndrome

BBS

Bardet-Biedl Syndrome, Type 1

Laurence-Moon-Bardet-Biedl Syndrome

Diseases Alias
Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Waldenstroem'S Macroglobulinemia

Waldenstroem'S Macroglobulinemia

Macroglobulinemia Of Waldenstrom

Lymphoplasmacytic Lymphoma With Igm Gammopathy

Lymphoplasmacytic Lymphoma

Orthologs Information

Species Symbol Source ID
Mus musculus RALY MGD MGI:97850
Bos taurus RALY VGNC VGNC:33706
Rattus norvegicus RALY RGD RGD:1307228
Canis familiaris RALY VGNC VGNC:45337
Felis catus RALY VGNC VGNC:81167
Macaca mulatta RALY VGNC VGNC:76486