1. Signaling Pathways
  2. Cell Cycle/DNA Damage
  3. Topoisomerase

Topoisomerase

Topoisomerase

Topoisomerases are enzymes that regulate the overwinding or underwinding of DNA. The winding problem of DNA arises due to the intertwined nature of its double-helical structure. Topoisomerases are isomerase enzymes that act on the topology of DNA. Type I topoisomerase cuts one strand of a DNA double helix, relaxation occurs, and then the cut strand is reannealed. Type I topoisomerases are subdivided into two subclasses: type IA topoisomerases, which share many structural and mechanistic features with the type II topoisomerases, and type IB topoisomerases, which utilize a controlled rotary mechanism. Type II topoisomerase cuts both strands of one DNA double helix, pass another unbroken DNA helix through it, and then reanneal the cut strands. This class is also split into two subclasses: type IIA and type IIB topoisomerases, which possess similar structure and mechanisms.

Cat. No. Product Name Effect Purity Chemical Structure
  • HY-122481
    Thaspine acetate
    Inhibitor
    Thaspine acetate, an alkaloid, is a topoisomerase I and II inhibitor. Thaspine acetate induces cancer cell apoptosis. Thaspine acetate induces Bak and Bax activation, mitochondrial cytochrome c release and mitochondrial membrane permeabilization. Thaspine acetate can be isoalted from the cortex of the South American tree Croton lechleri.
    Thaspine acetate
  • HY-400316
    Exatecan intermediate 8
    Inhibitor
    Exatecan intermediate 8 is an intermediate for the synthesis of Exatecan (HY-13631). Exatecan (DX-8951) is a common toxin component in ADC preparation (ADC Cytotoxin) and an inhibitor of DNA topoisomerase I (IC50=2.2 μM).
    Exatecan intermediate 8
  • HY-46081
    Exatecan Intermediate 3
    Inhibitor
    Exatecan Intermediate 3 is the intermediate of Exatecan (HY-13631) And Exatecan (DX-8951) is a DNA topoisomerase I inhibitor with an IC50 value of 2.2 μM (0.975 μg/mL) that can be used in cancer research. Exatecan Intermediate 3 can be used to synthesize Antibody-Drug Conjugates (ADCs).
    Exatecan Intermediate 3
  • HY-161813
    Antibacterial agent 229
    Inhibitor
    Antibacterial agent 229 (compound 8a) is a potent antibacterial agent. Antibacterial agent 229 shows antibacterial and antifungal abilities. Antibacterial agent 229 disrupts the integrity of the bacterial membrane, intercalates into DNA. Antibacterial agent 229 inhibits topoisomerase IV with an IC50 value of 10.88 µM.
    Antibacterial agent 229
  • HY-117657
    (-)-BO 2367
    Inhibitor
    (-)-BO 2367, an antimicrobial quinolone, is a strong mammalian and bacterial topoisomerase II inhibitor. (-)-BO 2367 shows IC50 values with 3.8 μM, 0.5 μM, and 1 μM against the DNA relaxation activity of L1210 topoisomerase II and the supercoiling activities of Escherichia coli gyrase and Micrococcus luteus gyrase, respectively. (-)-BO 2367 is a potent antitumor agent.
    (-)-BO 2367
  • HY-16562R
    Irinotecan (Standard)
    Inhibitor
    Irinotecan (Standard) is the analytical standard of Irinotecan. This product is intended for research and analytical applications. Irinotecan ((+)-Irinotecan) is a topoisomerase I inhibitor, preventing religation of the DNA strand by binding to topoisomerase I-DNA complex.
    Irinotecan (Standard)
  • HY-W178011
    Topoisomerase IIα-IN-9
    Inhibitor
    Topoisomerase IIα-IN-9 (NSC85582) is a bisphenol compound that has a moderate inhibitory effect on DNA topoisomerase Topoisomerase II (IC50: 571 μM). Topoisomerase IIα-IN-9 also exhibits a certain cell growth inhibitory effect, with IC50s of 117 μM and 218 μM for K562 and CHO, respectively.
    Topoisomerase IIα-IN-9
  • HY-B0879AR
    Suramin (sodium salt) (Standard)
    Inhibitor
    Suramin (sodium salt) (Standard) is the analytical standard of Suramin (sodium salt). This product is intended for research and analytical applications. Suramin sodium salt (Suramin hexasodium salt) is a reversible and competitive protein-tyrosine phosphatases (PTPases) inhibitor. Suramin sodium salt is a potent inhibitor of sirtuins: SirT1 (IC50=297 nM), SirT2 (IC50=1.15 μM), and SirT5 (IC50=22 μM). Suramin sodium salt is a competitive inhibitor of reverse transcriptase (DNA topoisomerase II: IC50=5 μM). Suramin sodium salt is a potent SARS-CoV-2 RNA-dependent RNA polymerase (RdRp) inhibitor. Suramin sodium salt efficiently inhibits IP5K and is an antiparasitic, anti-neoplastic and anti-angiogenic agent.
    Suramin (sodium salt) (Standard)
  • HY-13704R
    SN-38 (Standard)
    Inhibitor
    SN-38 (Standard) is the analytical standard of SN-38. This product is intended for research and analytical applications. SN-38 is an active metabolite of the Topoisomerase I inhibitor Irinotecan. SN-38 inhibits DNA and RNA synthesis with IC50s of 0.077 and 1.3 μM, respectively. SN-38 is a payload of sacituzumab govitecan (HY -132254).
    SN-38 (Standard)
  • HY-13551R
    Amsacrine (Standard)
    Inhibitor
    Amsacrine (Standard) is the analytical standard of Amsacrine. This product is intended for research and analytical applications. Amsacrine (m-AMSA; acridinyl anisidide) is an inhibitor of topoisomerase II, and acts as an antineoplastic agent which can intercalates into the DNA of tumor cells.
    Amsacrine (Standard)
  • HY-13565
    Becatecarin
    Inhibitor
    Becatecarin is a rebeccamycin analog with antitumor effects. Becatecarin intercalates into DNA and inhibites the catalytic activity of topoisomerases I/II.
    Becatecarin
  • HY-134290A
    8-Chloro-ATP tetrasodium
    Inhibitor
    8-Chloro-ATP tetrasodium, an ATP (HY-B2176) analog, is a topoisomerase II (Topo II) inhibitor. 8-Chloro-ATP tetrasodium inhibits DNA synthesis and induces DNA double-stranded breaks (DSBs). 8-Chloro-ATP tetrasodium inhibits Topo II-catalyzed ATP hydrolysis.
    8-Chloro-ATP tetrasodium
  • HY-161937
    Antibacterial agent 236
    Inhibitor
    Antibacterial agent 236 (Compound 4l) is an orally active inhibitor for DNA gyrase and topoisomerase IV (IC50 is 3.2 and 300 nM in Staphylococcus aureus), and exhibits board-spectrum antibacterial activity. Antibacterial agent 236 exhibits good pharmacokinetic properties in mice.
    Antibacterial agent 236
  • HY-13629R
    Etoposide (Standard)
    Inhibitor
    Etoposide (Standard) is the analytical standard of Etoposide. This product is intended for research and analytical applications. Etoposide (VP-16; VP-16-213) is an anti-cancer chemotherapy agent. Etoposide inhibits topoisomerase II, thus stopping DNA replication. Etoposide induces cell cycle arrest, apoptosis and autophagy.
    Etoposide (Standard)
  • HY-13768AR
    Topotecan (hydrochloride) (Standard)
    Inhibitor
    Topotecan (hydrochloride) (Standard) is the analytical standard of Topotecan (hydrochloride). This product is intended for research and analytical applications. Topotecan Hydrochloride (SKF 104864A Hydrochloride) is a Topoisomerase I inhibitor with potent antineoplastic activities.
    Topotecan (hydrochloride) (Standard)
  • HY-W010800R
    Cholesteryl hemisuccinate (Standard)
    Inhibitor
    Cholesteryl hemisuccinate (Standard)
  • HY-13629S
    Etoposide-d3
    Inhibitor
    Etoposide-d3 (VP-16-d3) is the deuterium labeled Etoposide (HY-13629). Etoposide (VP-16) is an anti-cancer chemotherapy agent. Etoposide inhibits topoisomerase II, thus stopping DNA replication. Etoposide induces cell cycle arrest, apoptosis and autophagy.
    Etoposide-d<sub>3</sub>
  • HY-13761R
    Teniposide (Standard)
    Inhibitor
    Teniposide (Standard) is the analytical standard of Teniposide. This product is intended for research and analytical applications. Teniposide is a podophyllotoxin derivative, acts as a topoisomerase II inhibitor, and used as a chemotherapeutic agent.
    Teniposide (Standard)
  • HY-116231
    (S)-Gyramide A
    Inhibitor
    (S)-Gyramide A is a weak inhibitor of cell proliferation that can target DNA gyrase.
    (S)-Gyramide A
  • HY-17460
    Garenoxacin
    Inhibitor
    Garenoxacin (BMS284756) is an orally active quinolone antibiotic and has a broad spectrum of activity against a wide array of gram-positive and gram-negative bacteria, anaerobes, and fastidious organisms.
    Garenoxacin
Cat. No. Product Name / Synonyms Application Reactivity

Topoisomerase

Topo I

Topo II

Your Search Returned No Results.

Sorry. There is currently no product that acts on isoform together.

Please try each isoform separately.

Topoisomerase Inhibitors & Agonists
Product NameTopoisomeraseTopo ITopo IIPurity    
Doxorubicin hydrochloride 
Topoisomerase I, IC50: 0.8 μM
Topoisomerase II, IC50: 2.67 μM
99.90%
Etoposide  
Topoisomerase II
99.94%
Dxd 
Topoisomerase I, IC50: 0.31 μM
 99.30%
SN-38 
Topoisomerase I
 99.89%
Camptothecin 
Topoisomerase I, IC50: 679 nM
 99.86%
Irinotecan 
Topoisomerase I
 99.97%
Topotecan hydrochloride 
Topoisomerase I
 99.89%
Daunorubicin hydrochloride  
Topoisomerase II
99.67%
Mitoxantrone  
Topoisomerase II
99.58%
Epirubicin hydrochloride
Topoisomerase
  99.16%
Irinotecan hydrochloride 
Topoisomerase I
 99.89%
Datopotamab deruxtecan 
Topoisomerase I
 99.54%
Levofloxacin
TOPO IV
  99.92%
Idarubicin hydrochloride  
Topoisomerase II
99.94%
Betulinic acid 
Topoisomerase I, IC50: 5 μM
 98.43%
Mitoxantrone dihydrochloride  
Topoisomerase II
99.55%
Dxd-d5 
Topoisomerase I, IC50: 0.31 μM
 98.84%
β-Lapachone 
Topoisomerase I
 99.99%
Teniposide  
Topoisomerase II
99.00%
Pirarubicin  
Topoisomerase II
99.61%
Irinotecan hydrochloride trihydrate 
Topoisomerase I
 99.89%
Belotecan hydrochloride 
Top1
 99.88%
PNU-159682 
Topoisomerase I
 98.25%
Etoposide phosphate  
Topoisomerase II
Aldoxorubicin  
Topoisomerase II
Aclacinomycin A 
Topoisomerase I
Topoisomerase II
99.30%
Aurintricarboxylic acid  
Topoisomerase II
Banoxantrone dihydrochloride  
Topoisomerase II
99.46%
Nalidixic acid
Topoisomerase
  99.97%
Proscillaridin A 
Topoisomerase I, IC50: 30 nM
Topoisomerase II, IC50: 100 nM
99.74%
Levofloxacin hydrate
TOPO IV
  99.93%
Pirarubicin Hydrochloride  
Topoisomerase II
98.56%
Pixantrone  
Topoisomerase II
98.75%
(S)-10-Hydroxycamptothecin 
Topoisomerase I
 99.38%
Ellipticine  
Topoisomerase II
99.56%
Bisantrene  
Topoisomerase II
98.08%
Amsacrine  
Topoisomerase II
99.95%
Gatifloxacin  
Topoisomerase II, IC50: 36.7 μM
99.69%
MC-GGFG-AM-(10Me-11F-Camptothecin) 
Topoisomerase I
 98.06%
PluriSIn #2  
topoisomerase II alpha
≥98.0%
Ellipticine hydrochloride  
Topoisomerase II
99.34%
Hycanthone 
Topoisomerase I
Topoisomerase II
99.97%
Amonafide  
Topoisomerase II
99.92%
Voreloxin Hydrochloride  
Topoisomerase II
99.58%
Coralyne chloride 
Topoisomerase I
 98.30%
MC-DOXHZN hydrochloride  
Topoisomerase II
98.04%
Amsacrine hydrochloride  
Topoisomerase II
99.98%
TAS-103 dihydrochloride 
Topoisomerase I
Topoisomerase II
98.87%
Amrubicin  
Topoisomerase II
≥98.0%
Genz-644282 
Topoisomerase I
 99.53%
Chloroquinoxaline sulfonamide  
topoisomerase II alpha
topoisomerase II beta
99.06%
9-Aminocamptothecin 
Topoisomerase I
 98.89%
Indotecan 
Topoisomerase I
 ≥98.0%
(±)-10-Hydroxycamptothecin 
Topoisomerase I
 99.57%
Nalidixic acid sodium salt
Topoisomerase
  99.83%
Intoplicine 
Topoisomerase I
Topoisomerase II
98.36%
Gatifloxacin hydrochloride  
Topoisomerase II, : 36.7 μM
99.94%
Daun02
Topoisomerase
  98.72%
Flumequine  
Topoisomerase II, IC50: 15 μM
Gimatecan 
Topoisomerase I
 99.28%
(±)-Evodiamine 
Top1
 99.74%
Lurtotecan 
Topoisomerase I
 98.01%
Isodiospyrin 
Topoisomerase I
 99.77%
Karenitecin 
Topoisomerase I
 98.02%
LMP744 hydrochloride 
Top1
 99.70%
Groenlandicine 
Topoisomerase I
 99.87%
Indimitecan 
Top1
 98.30%
ARN-21934  
topoisomerase II alpha
topoisomerase II beta
98.08%
Levofloxacin hydrochloride
TOPO IV
  ≥98.0%
Podocarpusflavone A 
Topoisomerase I, IC50: 119.425 μM
 99.62%
LMP517 
Topoisomerase I
Topoisomerase II
99.58%
Garenoxacin Mesylate hydrate
TOPO IV, IC50: 1.5-2.5 μg/mL
  99.78%
LMP744 
Top1
 98.85%
Aclacinomycin A hydrochloride 
Topoisomerase I
Topoisomerase II
Namitecan 
Topoisomerase I
 99.25%
Topoisomerase I inhibitor 8 
Topoisomerase I
 
Elomotecan hydrochloride 
Topoisomerase I
Topoisomerase II
Epirubicin
Topoisomerase
  98.45%
Topoisomerase II inhibitor 20 TFA  
Topoisomerase II, IC50: 0.98 μM
9-Hydroxyellipticine hydrochloride  
Topoisomerase II
≥99.0%
SW044248 
Topoisomerase I
 99.60%
Topotecan 
Topoisomerase I
 
Doxorubicin 
Topoisomerase I, IC50: 0.8 μM
Topoisomerase II, IC50: 2.67 μM
Daunorubicin  
Topoisomerase II
Topoisomerase II inhibitor 20  
Topoisomerase II, IC50: 0.98 μM
98.44%
CH-0793076 
Topoisomerase I, IC50: 2.3 μM
 
AQ4  
Topoisomerase II
BNS-22  
topoisomerase II alpha, IC50: 2.8 μM (in human)
topoisomerase II beta, IC50: 0.42 μM (in human)
99%
Seconeolitsine 
Topoisomerase I, IC50: 17 μM
 
Edotecarin 
Topoisomerase I, IC50: 50 nM
 98.39%
CH-0793076 TFA 
Topoisomerase I, IC50: 2.3 μM
 98.71%
Zabofloxacin 
Topoisomerase I
Topoisomerase II
98.02%
Zabofloxacin hydrochloride 
Topoisomerase I
Topoisomerase II
99.54%
Amrubicin hydrochloride  
Topoisomerase II
Pixantrone free base  
Topoisomerase II
Voreloxin  
Topoisomerase II
99.26%
TAS-103 
Topoisomerase I
Topoisomerase II
MC-DOXHZN  
Topoisomerase II
Topotecan hydrochloride hydrate 
Topoisomerase I
 
Etoposide phosphate disodium  
Topoisomerase II
Idarubicin  
Topoisomerase II
Gatifloxacin sesquihydrate  
Topoisomerase II, IC50: 36.7 μM
Rebeccamycin 
Topoisomerase I
 
Mitoxantrone diacetate  
Topoisomerase II
CBX-12 
Topoisomerase I
 
Daunorubicin citrate  
Topoisomerase II
Antitumor agent-63 
Top1
 
Silatecan 
Topoisomerase I
 
Topoisomerase II inhibitor 9  
Topoisomerase II, IC50: 0.97 μM
Topo I/COX-2-IN-1 
Topoisomerase I, IC50: 4.42 μM
 
Bimolane  
Topoisomerase II
T-2513 hydrochloride 
Topoisomerase I
 
TOPOI/PARP-1-IN-2 
Top1, IC50: 46.2 nM
 
Topo I/COX-2-IN-2 
Topoisomerase I, IC50: 0.90 μM
 
Topoisomerase II inhibitor 11  
Topoisomerase II, IC50: 2.89 μM
CS1  
topoisomerase II alpha
T-2513 
Topoisomerase I
 
Razoxane  
Topoisomerase II
99.16%
Topoisomerase IIα-IN-3  
topoisomerase II alpha
Heliquinomycin 
Topoisomerase I
Topoisomerase II
Topoisomerase II/EGFR-IN-1  
Topoisomerase II
VcMMAE-Deruxtecan 
Topoisomerase I
 
Anticancer agent 75  
Topoisomerase II
CP-67804  
Topoisomerase II
DTS-108 
Top1
 
Pixantrone hydrochloride  
Topoisomerase II
Topoisomerase II inhibitor 4  
Topoisomerase II
Topoisomerase IIα-IN-6  
topoisomerase II alpha, IC50: 0.67 μM
Topoisomerase IIα-IN-2  
topoisomerase II alpha
topoisomerase II beta
Topoisomerase IIα-IN-4  
topoisomerase II alpha, IC50: 3.8 μM
topoisomerase II beta, IC50: 10.1 μM
ZLHQ-5f 
Top1
 
3-Fluoro-evodiamine glucose 
Topoisomerase I
Topoisomerase II
Topo I-IN-1 
Topoisomerase I
 
Topoisomerase I/II inhibitor 6 
Topoisomerase I, IC50: 4.77 μM
Topoisomerase II, IC50: 15 μM
EGFR-IN-116  
Topoisomerase II, IC50: 19.74 μM
Top/HDAC-IN-2 
Top1
Topoisomerase II
Anti-MRSA agent 7
TOPO IV, IC50: 0.059 μM (E. coli )
TOPO IV, IC50: 0.341 μM (S. aureus)
  
Topoisomerase II inhibitor 18  
Topoisomerase II, IC50: 7.5 μM
Topoisomerase I inhibitor 17 
Top1
 
Elomotecan 
Topoisomerase I
Topoisomerase II
Topoisomerase II inhibitor 5  
Topoisomerase II
LE01 
Topoisomerase I
 
HSP90-IN-13
Topoisomerase-2, IC50: 25.85 nM
  
Topoisomerase I inhibitor 2 
Topoisomerase I, IC50: 0.58 μM
 
iNOS/TopoI-IN-1 
Topoisomerase I, Ki: 2.72 μM
 
Topoisomerase II inhibitor 10  
Topoisomerase II, IC50: 7.45 μM
Salvicine  
Topoisomerase II, IC50: 3 μM
Topoisomerase IV inhibitor 1
TOPO IV, IC50: 0.23 μM
  
Topoisomerase II inhibitor 13  
Topoisomerase II
99.26%
EGFR-IN-57  
topoisomerase II beta, IC50: 0.13 μM
Topoisomerase IIα-IN-1  
topoisomerase II alpha
topoisomerase II beta
Huanglongmycin N 
Topoisomerase I, EC50: 14 μM
 
Topoisomerase IIα-IN-8  
topoisomerase II alpha
Tilatamig samrotecan 
Topoisomerase I
 
Deruxtecan-Eribulin 
Topoisomerase I
 
CP-67015  
Topoisomerase II
Tapcin 
Topoisomerase I, IC50: 203 nM
Topoisomerase II, IC50: 71 nM
Topoisomerase I inhibitor 12 
Topoisomerase I
 
Topoisomerase II inhibitor 17  
Topoisomerase II, IC50: 0.23 μM
Topoisomerase I/II inhibitor 2 
Topoisomerase I
Topoisomerase II
Topo I/II-IN-2 
Topoisomerase I
Topoisomerase II
Saintopin 
Topoisomerase I
Topoisomerase II
Intoplicine dimesylate 
Topoisomerase I
Topoisomerase II
98.28%
Topoisomerase IV inhibitor 2
TOPO IV, IC50: 0.35 μM
  
Topoisomerase II inhibitor 7  
topoisomerase II alpha, IC50: 3.19 μM
Topoisomerase I/II inhibitor 7 
Topoisomerase I
Topoisomerase II
Topoisomerase IIα-IN-7  
topoisomerase II alpha, IC50: 7.7 μM
Niranthin
Topoisomerase
  
Epolactaene  
Topoisomerase II, IC50: 10 μM
Topoisomerase I inhibitor 3 
Topoisomerase I
 
Topoisomerase II inhibitor 19  
Topoisomerase II, IC50: 0.34 μM
Corydamine 
Topoisomerase I
Topoisomerase II
TP0480066  
Topoisomerase II
AZD5099  
Topoisomerase II
Topoisomerase I inhibitor 16 
Topoisomerase I
 
TP3011 
Topoisomerase I
 
Topoisomerase II inhibitor 8  
Topoisomerase II, IC50: 0.52 μM
Topoisomerase I/II inhibitor 3 
Topoisomerase I
Topoisomerase II
Gatifloxacin mesylate  
Topoisomerase II, IC50: 36.7 μM
Topoisomerase IIα-IN-5  
topoisomerase II alpha
Bakuchicin  
Topoisomerase II, IC50: 404 μM
Thaspine acetate 
Topoisomerase I
Topoisomerase II
Antibacterial agent 229
TOPO IV, IC50: 10.88 μM
  
(-)-BO 2367  
Topoisomerase II
8-Chloro-ATP tetrasodium  
Topoisomerase II
Garenoxacin
TOPO IV, IC50: 1.5-2.5 μg/mL
  
HU 331  
Topoisomerase II
Luotonin F  
Topoisomerase II
Topovale 
Topoisomerase I
 
NK 314  
topoisomerase II alpha
8-Chloro-ATP  
Topoisomerase II