1. Signaling Pathways
  2. Cell Cycle/DNA Damage
  3. Topoisomerase

Topoisomerase

Topoisomerase

Topoisomerases are enzymes that regulate the overwinding or underwinding of DNA. The winding problem of DNA arises due to the intertwined nature of its double-helical structure. Topoisomerases are isomerase enzymes that act on the topology of DNA. Type I topoisomerase cuts one strand of a DNA double helix, relaxation occurs, and then the cut strand is reannealed. Type I topoisomerases are subdivided into two subclasses: type IA topoisomerases, which share many structural and mechanistic features with the type II topoisomerases, and type IB topoisomerases, which utilize a controlled rotary mechanism. Type II topoisomerase cuts both strands of one DNA double helix, pass another unbroken DNA helix through it, and then reanneal the cut strands. This class is also split into two subclasses: type IIA and type IIB topoisomerases, which possess similar structure and mechanisms.

Cat. No. Product Name Effect Purity Chemical Structure
  • HY-101647A
    Intoplicine dimesylate
    Inhibitor 98.28%
    Intoplicine (RP 60475) dimesylate, an antitumor derivative in the 7H-benzo[e]pyrido[4,3-b]indole series, is a DNA topoisomerase I and II inhibitor. Intoplicine dimesylate strongly binds DNA (KA = 2 x 105 /M) and thereby increases the length of linear DNA.
    Intoplicine dimesylate
  • HY-10919
    C-1311
    Inhibitor
    C-1311 shows to inhibit the catalytic activity of DNA topoisomerase II in vitro and in tumour cells. C-1311 prolongs G2 arrest followed by G2 to M transit and cell death during mitosis in the process of mitotic catastrophe.
    C-1311
  • HY-115991
    Topoisomerase IV inhibitor 2
    Inhibitor
    Topoisomerase IV inhibitor 2 (compound 5d) is a potent DNA topoisomerase IV (TOPO IV) inhibitor with IC50s of 0.35 μM and 0.55 μM for TOPO IV and DNA gyrase, respectively. Topoisomerase IV inhibitor 2 has anti-bacterial activity, with MICs of 1.985 μM and 0.744 μM in Staphylococcus aureus Newman and Escherichia coli ATCC8739, respectively.
    Topoisomerase IV inhibitor 2
  • HY-158230
    SN-398
    Inhibitor
    SN-398 is a derivative of Camptothecin (HY-158230), which is an antitumor drug. Acting by inhibiting mammalian DNA topoisomerase I (Topo I), stabilizing the Topo I-DNA complex prevents DNA rewiring to induce Topo I mediated DNA breaks. In Hela cell tests, SN-398 shows stronger antitumor activity than SN-38 (HY-13704) (IC50=1.562 μM). SN-398 can be used to study the anti-proliferation and growth inhibition of Topo I in cancer cells.
    SN-398
  • HY-146163
    Topoisomerase II inhibitor 7
    Inhibitor
    Topoisomerase II inhibitor 7 (compound 3a) is a potent inhibitor of topoisomerase II alpha subtype, with an IC50 of 3.19 μM. Topoisomerase II inhibitor 7 can induce cell cycle arrest and apoptosis.
    Topoisomerase II inhibitor 7
  • HY-13551B
    Amsacrine (gluconate)
    Inhibitor
    Amsacrine gluconate is an inhibitor of topoisomerase II, and acts as an antineoplastic agent which can intercalates into the DNA of tumor cells.
    Amsacrine (gluconate)
  • HY-146497
    Topoisomerase I inhibitor 7
    Inhibitor
    Topoisomerase I inhibitor 7 (Compound 8) is a potent inhibitor of Topoisomerase I. Topoisomerase I inhibitor 7 significantly inhibits tumor growth (up to 79%) and increases the lifespan (153%) of mice bearing P388 lymphoma transplants. Topoisomerase I inhibitor 7 indicates prospects for further search of new antitumor agent candidates among the heteroarene-fused anthraquinones.
    Topoisomerase I inhibitor 7
  • HY-159483
    SelB-1
    Inhibitor
    SelB-1 serves as a dual inhibitor for Topoisomerase I/II. SelB-1 possesses anticancer activity and can be utilized in the research of prostate cancer and colon cancer. Furthermore, SelB-1 is also capable of inducing autophagy gene expression and lipid peroxidation, while simultaneously reducing the level of GSH.
    SelB-1
  • HY-19943
    TLC388
    Inhibitor
    TLC388 is a novel camptothecin analog with limited antitumor activity in metastatic NEC.
    TLC388
  • HY-145290
    CPT-Se3
    Inhibitor
    CPT-Se3, a selenoproagent of Camptothecin (CPT), shows improved potency in killing cancer cells and inhibiting tumor growth. CPT–Se3 decreases the GSH/GSSG ratio and total thiols, elevates the ROS level in Hep G2 cells, and eventually induces apoptosis of cancer cells. CPT-Se3 shows cytotoxicity against HeLa, Hep G2, A549, and SMMC-7721 cells (IC50= 2.19-4.7 μM).
    CPT-Se3
  • HY-169628
    Topoisomerase I/II inhibitor 7
    Inhibitor
    Topoisomerase I/II inhibitor 7 (Compound 5h) is a Topoisomerase I/II inhibitor.
    Topoisomerase I/II inhibitor 7
  • HY-158138
    TOPOI/PARP-1-IN-1
    Inhibitor
    TOPOI/PARP-1-IN-1 (Compound B6) is an orally active, low cytotoxic TOPOI/PARP dual inhibitor with an IC50 value of 0.09 μM for PARP1. TOPOI/PARP-1-IN-1 can effectively inhibit the proliferation and migration of cancer cells. TOPOI/PARP-1-IN-1 also causes cell cycle arrest in the G0/G1 phase and induces apoptosis. The tumor growth inhibition rate (TGI) of TOPOI/PARP-1-IN-1 in mice is 75.4%.
    TOPOI/PARP-1-IN-1
  • HY-W338859
    Levofloxacin mesylate
    Inhibitor
    Levofloxacin mesylate is an orally active antibiotic and is active against both Gram-positive and Gram-negative bacteria. Levofloxacin mesylate inhibits the DNA gyrase and topoisomerase IV. Levofloxacin mesylate can be used for chronic periodontitis, airway inflammation and BK Viremia research. Levofloxacin mesylate shows anti-orthopoxvirus activity.
    Levofloxacin mesylate
  • HY-152479
    Topoisomerase IIα-IN-7
    Inhibitor
    Topoisomerase IIα-IN-7 is an DNA topoisomerase IIα inhibitor with an IC50 value of 7.7 µM. Topoisomerase IIα-IN-7 has broad-spectrum cytotoxicity to leukemia, lung, colon, melanoma, ovarian, kidney, prostate and breast cancer cells. Topoisomerase IIα-IN-7 has metabolic stability.
    Topoisomerase IIα-IN-7
  • HY-18351A
    Indotecan hydrochloride
    Inhibitor
    Indotecan hydrochloride, an indenoisoquinoline derivative, is a potent Topoisomerase I inhibitor, with IC50s of 300, 1200, 560 nM for P388, HCT116, MCF-7 cell lines, respectively. Indotecan hydrochloride prevents the relaxation of supercoiled DNA and can be used for the research of visceral leishmaniasis.
    Indotecan hydrochloride
  • HY-18258S
    Berberine-d6 chloride
    Inhibitor
    Berberine-d6 (chloride) is the deuterium labeled Berberine chloride. Berberine chloride is an alkaloid that acts as an antibiotic. Berberine chloride induces reactive oxygen species (ROS) generation and inhibits DNA topoisomerase. Antineoplastic properties[1].
    Berberine-d<sub>6</sub> chloride
  • HY-114983
    Chimmitecan
    Inhibitor 98.96%
    Chimmitecan ((S)-9-Allyl-10-Hydroxycamptothecin), a novel 9-small-alkyl-substituted lipophilic Camptothecin (HY-16560), is a potent inhibitor of topoisomerase I. Chimmitecan exhibits anticancer activity.
    Chimmitecan
  • HY-N6621A
    Hippeastrine hydrobromide
    Inhibitor
    Hippeastrine hydrobromide is an active alkaloid that exhibits a good dose-dependent inhibitory effect on topoisomerase I (Top I) with an IC50 of 7.25?μg/mL. Hippeastrine hydrobromide exhibits antiproliferative and anticancer activities.
    Hippeastrine hydrobromide
  • HY-N6054
    Niranthin
    Inhibitor
    Niranthin, a lignan with a wide spectrum of pharmacological activities. Niranthin is a potent and non-competitive inhibitor of heterodimeric type IB topoisomerase of L. donovani. Niranthin can be used for the research of drug-resistant leishmaniasis research.
    Niranthin
  • HY-B0067B
    (R)-Amrubicin
    Inhibitor
    (R)-Amrubicin ((R)-SM-5887) is an anthracycline that effectively treats lung cancer by intercalating into DNA and inhibiting topoisomerase II activity, which consequently hampers DNA replication as well as RNA and protein synthesis, leading to cell growth inhibition and apoptosis. This compound exhibits superior anti-tumor efficacy compared to traditional anthracycline drugs while lacking the cumulative cardiac toxicity typically associated with this drug class.
    (R)-Amrubicin
Cat. No. Product Name / Synonyms Application Reactivity

Topoisomerase

Topo I

Topo II

Your Search Returned No Results.

Sorry. There is currently no product that acts on isoform together.

Please try each isoform separately.

Topoisomerase Inhibitors & Agonists
Product NameTopoisomeraseTopo ITopo IIPurity    
Doxorubicin hydrochloride 
Topoisomerase I, IC50: 0.8 μM
Topoisomerase II, IC50: 2.67 μM
99.90%
Etoposide  
Topoisomerase II
99.94%
Dxd 
Topoisomerase I, IC50: 0.31 μM
 99.43%
SN-38 
Topoisomerase I
 99.89%
Topoisomerase II inhibitor 20 TFA  
Topoisomerase II, IC50: 0.98 μM
Camptothecin 
Topoisomerase I, IC50: 679 nM
 99.86%
Irinotecan 
Topoisomerase I
 99.97%
Topotecan hydrochloride 
Topoisomerase I
 99.89%
Daunorubicin hydrochloride  
Topoisomerase II
99.67%
Mitoxantrone  
Topoisomerase II
99.58%
Epirubicin hydrochloride
Topoisomerase
  99.16%
Irinotecan hydrochloride 
Topoisomerase I
 99.89%
Datopotamab deruxtecan 
Topoisomerase I
 99.54%
Levofloxacin
TOPO IV
  99.92%
Idarubicin hydrochloride  
Topoisomerase II
99.94%
Betulinic acid 
Topoisomerase I, IC50: 5 μM
 99.06%
Mitoxantrone dihydrochloride  
Topoisomerase II
99.55%
β-Lapachone 
Topoisomerase I
 99.96%
Dxd-d5 
Topoisomerase I, IC50: 0.31 μM
 98.84%
Teniposide  
Topoisomerase II
99.00%
Pirarubicin  
Topoisomerase II
99.61%
Irinotecan hydrochloride trihydrate 
Topoisomerase I
 99.89%
Belotecan hydrochloride 
Top1
 99.88%
Etoposide phosphate  
Topoisomerase II
PNU-159682 
Topoisomerase I
 98.25%
Aclacinomycin A 
Topoisomerase I
Topoisomerase II
99.30%
Aldoxorubicin  
Topoisomerase II
Aurintricarboxylic acid  
Topoisomerase II
Banoxantrone dihydrochloride  
Topoisomerase II
99.46%
Nalidixic acid
Topoisomerase
  99.97%
Proscillaridin A 
Topoisomerase I, IC50: 30 nM
Topoisomerase II, IC50: 100 nM
99.74%
Levofloxacin hydrate
TOPO IV
  99.93%
Pirarubicin Hydrochloride  
Topoisomerase II
99.14%
Pixantrone  
Topoisomerase II
98.75%
(S)-10-Hydroxycamptothecin 
Topoisomerase I
 99.38%
Ellipticine  
Topoisomerase II
99.56%
Bisantrene  
Topoisomerase II
98.08%
Amsacrine  
Topoisomerase II
99.95%
Gatifloxacin  
Topoisomerase II, IC50: 36.7 μM
99.69%
MC-GGFG-AM-(10Me-11F-Camptothecin) 
Topoisomerase I
 98.06%
Ellipticine hydrochloride  
Topoisomerase II
99.34%
PluriSIn #2  
topoisomerase II alpha
≥98.0%
Hycanthone 
Topoisomerase I
Topoisomerase II
99.97%
Amonafide  
Topoisomerase II
99.92%
Voreloxin Hydrochloride  
Topoisomerase II
99.58%
Coralyne chloride 
Topoisomerase I
 98.30%
Amsacrine hydrochloride  
Topoisomerase II
99.98%
Amrubicin  
Topoisomerase II
≥98.0%
9-Aminocamptothecin 
Topoisomerase I
 98.89%
TAS-103 dihydrochloride 
Topoisomerase I
Topoisomerase II
98.87%
Genz-644282 
Topoisomerase I
 99.53%
MC-DOXHZN hydrochloride  
Topoisomerase II
98.04%
Chloroquinoxaline sulfonamide  
topoisomerase II alpha
topoisomerase II beta
99.06%
Indotecan 
Topoisomerase I
 ≥98.0%
(±)-10-Hydroxycamptothecin 
Topoisomerase I
 99.57%
Nalidixic acid sodium salt
Topoisomerase
  99.83%
Flumequine  
Topoisomerase II, IC50: 15 μM
Daun02
Topoisomerase
  98.72%
Intoplicine 
Topoisomerase I
Topoisomerase II
98.36%
Gimatecan 
Topoisomerase I
 99.28%
Gatifloxacin hydrochloride  
Topoisomerase II, : 36.7 μM
99.94%
Lurtotecan 
Topoisomerase I
 98.01%
Isodiospyrin 
Topoisomerase I
 99.77%
(±)-Evodiamine 
Top1
 99.74%
Karenitecin 
Topoisomerase I
 98.02%
LMP744 hydrochloride 
Top1
 99.70%
Levofloxacin hydrochloride
TOPO IV
  ≥98.0%
Groenlandicine 
Topoisomerase I
 99.87%
Indimitecan 
Top1
 98.30%
Namitecan 
Topoisomerase I
 99.25%
ARN-21934  
topoisomerase II alpha
topoisomerase II beta
98.08%
Podocarpusflavone A 
Topoisomerase I, IC50: 119.425 μM
 99.62%
LMP517 
Topoisomerase I
Topoisomerase II
99.58%
Garenoxacin Mesylate hydrate
TOPO IV, IC50: 1.5-2.5 μg/mL
  99.78%
LMP744 
Top1
 98.85%
Aclacinomycin A hydrochloride 
Topoisomerase I
Topoisomerase II
Topoisomerase I inhibitor 8 
Topoisomerase I
 
Elomotecan hydrochloride 
Topoisomerase I
Topoisomerase II
Epirubicin
Topoisomerase
  98.45%
Zabofloxacin hydrochloride 
Topoisomerase I
Topoisomerase II
99.54%
9-Hydroxyellipticine hydrochloride  
Topoisomerase II
≥99.0%
SW044248 
Topoisomerase I
 99.60%
Topotecan 
Topoisomerase I
 
Doxorubicin 
Topoisomerase I, IC50: 0.8 μM
Topoisomerase II, IC50: 2.67 μM
Daunorubicin  
Topoisomerase II
Topoisomerase II inhibitor 20  
Topoisomerase II, IC50: 0.98 μM
98.44%
Pefloxacin 
Topoisomerase I
 99.79%
CH-0793076 
Topoisomerase I, IC50: 2.3 μM
 
AQ4  
Topoisomerase II
BNS-22  
topoisomerase II alpha, IC50: 2.8 μM (in human)
topoisomerase II beta, IC50: 0.42 μM (in human)
99%
Seconeolitsine 
Topoisomerase I, IC50: 17 μM
 
Edotecarin 
Topoisomerase I, IC50: 50 nM
 98.39%
CH-0793076 TFA 
Topoisomerase I, IC50: 2.3 μM
 98.71%
Zabofloxacin 
Topoisomerase I
Topoisomerase II
98.02%
Amrubicin hydrochloride  
Topoisomerase II
Pixantrone free base  
Topoisomerase II
Voreloxin  
Topoisomerase II
99.26%
TAS-103 
Topoisomerase I
Topoisomerase II
MC-DOXHZN  
Topoisomerase II
Topotecan hydrochloride hydrate 
Topoisomerase I
 
Etoposide phosphate disodium  
Topoisomerase II
Idarubicin  
Topoisomerase II
Gatifloxacin sesquihydrate  
Topoisomerase II, IC50: 36.7 μM
Rebeccamycin 
Topoisomerase I
 
Mitoxantrone diacetate  
Topoisomerase II
CBX-12 
Topoisomerase I
 
Daunorubicin citrate  
Topoisomerase II
Antitumor agent-63 
Top1
 
Silatecan 
Topoisomerase I
 
Topoisomerase II inhibitor 9  
Topoisomerase II, IC50: 0.97 μM
Topo I/COX-2-IN-1 
Topoisomerase I, IC50: 4.42 μM
 
Bimolane  
Topoisomerase II
T-2513 hydrochloride 
Topoisomerase I
 
TOPOI/PARP-1-IN-2 
Top1, IC50: 46.2 nM
 
Topo I/COX-2-IN-2 
Topoisomerase I, IC50: 0.90 μM
 
Topoisomerase II inhibitor 11  
Topoisomerase II, IC50: 2.89 μM
CS1  
topoisomerase II alpha
T-2513 
Topoisomerase I
 
Razoxane  
Topoisomerase II
99.16%
Topoisomerase IIα-IN-3  
topoisomerase II alpha
Heliquinomycin 
Topoisomerase I
Topoisomerase II
Topoisomerase II/EGFR-IN-1  
Topoisomerase II
VcMMAE-Deruxtecan 
Topoisomerase I
 
Anticancer agent 75  
Topoisomerase II
CP-67804  
Topoisomerase II
DTS-108 
Top1
 
Pixantrone hydrochloride  
Topoisomerase II
Topoisomerase II inhibitor 4  
Topoisomerase II
Topoisomerase IIα-IN-6  
topoisomerase II alpha, IC50: 0.67 μM
Topoisomerase IIα-IN-2  
topoisomerase II alpha
topoisomerase II beta
Topoisomerase IIα-IN-4  
topoisomerase II alpha, IC50: 3.8 μM
topoisomerase II beta, IC50: 10.1 μM
ZLHQ-5f 
Top1
 
3-Fluoro-evodiamine glucose 
Topoisomerase I
Topoisomerase II
Topo I-IN-1 
Topoisomerase I
 
Topoisomerase I/II inhibitor 6 
Topoisomerase I, IC50: 4.77 μM
Topoisomerase II, IC50: 15 μM
EGFR-IN-116  
Topoisomerase II, IC50: 19.74 μM
Top/HDAC-IN-2 
Top1
Topoisomerase II
Anti-MRSA agent 7
TOPO IV, IC50: 0.059 μM (E. coli )
TOPO IV, IC50: 0.341 μM (S. aureus)
  
Topoisomerase II inhibitor 18  
Topoisomerase II, IC50: 7.5 μM
Topoisomerase I inhibitor 17 
Top1
 
Elomotecan 
Topoisomerase I
Topoisomerase II
Topoisomerase II inhibitor 5  
Topoisomerase II
LE01 
Topoisomerase I
 
HSP90-IN-13
Topoisomerase-2, IC50: 25.85 nM
  
Topoisomerase I inhibitor 2 
Topoisomerase I, IC50: 0.58 μM
 
iNOS/TopoI-IN-1 
Topoisomerase I, Ki: 2.72 μM
 
Topoisomerase II inhibitor 10  
Topoisomerase II, IC50: 7.45 μM
Salvicine  
Topoisomerase II, IC50: 3 μM
Topoisomerase IV inhibitor 1
TOPO IV, IC50: 0.23 μM
  
Topoisomerase II inhibitor 13  
Topoisomerase II
99.26%
EGFR-IN-57  
topoisomerase II beta, IC50: 0.13 μM
Topoisomerase IIα-IN-1  
topoisomerase II alpha
topoisomerase II beta
Huanglongmycin N 
Topoisomerase I, EC50: 14 μM
 
Topoisomerase IIα-IN-8  
topoisomerase II alpha
Tilatamig samrotecan 
Topoisomerase I
 
Deruxtecan-Eribulin 
Topoisomerase I
 
CP-67015  
Topoisomerase II
Tapcin 
Topoisomerase I, IC50: 203 nM
Topoisomerase II, IC50: 71 nM
Topoisomerase I inhibitor 12 
Topoisomerase I
 
Topoisomerase II inhibitor 17  
Topoisomerase II, IC50: 0.23 μM
Topoisomerase I/II inhibitor 2 
Topoisomerase I
Topoisomerase II
Topo I/II-IN-2 
Topoisomerase I
Topoisomerase II
Saintopin 
Topoisomerase I
Topoisomerase II
Intoplicine dimesylate 
Topoisomerase I
Topoisomerase II
98.28%
Topoisomerase IV inhibitor 2
TOPO IV, IC50: 0.35 μM
  
Topoisomerase II inhibitor 7  
topoisomerase II alpha, IC50: 3.19 μM
Topoisomerase I/II inhibitor 7 
Topoisomerase I
Topoisomerase II
Topoisomerase IIα-IN-7  
topoisomerase II alpha, IC50: 7.7 μM
Niranthin
Topoisomerase
  
Epolactaene  
Topoisomerase II, IC50: 10 μM
Topoisomerase I inhibitor 3 
Topoisomerase I
 
Topoisomerase II inhibitor 19  
Topoisomerase II, IC50: 0.34 μM
Corydamine 
Topoisomerase I
Topoisomerase II
TP0480066  
Topoisomerase II
AZD5099  
Topoisomerase II
Topoisomerase I inhibitor 16 
Topoisomerase I
 
TP3011 
Topoisomerase I
 
Topoisomerase II inhibitor 8  
Topoisomerase II, IC50: 0.52 μM
Topoisomerase I/II inhibitor 3 
Topoisomerase I
Topoisomerase II
Gatifloxacin mesylate  
Topoisomerase II, IC50: 36.7 μM
Topoisomerase IIα-IN-5  
topoisomerase II alpha
Bakuchicin  
Topoisomerase II, IC50: 404 μM
Thaspine acetate 
Topoisomerase I
Topoisomerase II
Antibacterial agent 229
TOPO IV, IC50: 10.88 μM
  
(-)-BO 2367  
Topoisomerase II
8-Chloro-ATP tetrasodium  
Topoisomerase II
Garenoxacin
TOPO IV, IC50: 1.5-2.5 μg/mL
  
HU 331  
Topoisomerase II
Luotonin F  
Topoisomerase II
Topovale 
Topoisomerase I
 
NK 314  
topoisomerase II alpha
8-Chloro-ATP  
Topoisomerase II